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PLM3_127_b2_sep16_scaffold_857_5

Organism: PLM3_127_b2_sep16_Actinobacteridae_Actinomycetales_72_71

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: 6486..7088

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY24_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 178.0
  • Bit_score: 194
  • Evalue 7.00e-47
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 178.0
  • Bit_score: 194
  • Evalue 2.00e-47
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA24265.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 178.0
  • Bit_score: 194
  • Evalue 9.80e-47

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCGAGGAGCCAAGGCGTACCGAGGCCTCCAAGACGGGCAACTGGTCGCGCTCGTGGCCGAGAAGGACCCAGATGCCCTCGAGGCCCTGTACGACCGCTACGGGAAGGTGTCCTACTCGCTCGCGCGCCGGATCATGGCCGATGCGACGCTTGCCCAGGATGTGGTGCAGGAAGTGTTCCTCTCGCTTTGGCGTGATGCGCACCGGTTCGATGCCGGGCGAGGAACCGTGGCCACGTACCTGCTGTCCATGACCCACCACCGCGCCGTGGACGTCGTCCGGCGCGAGGAGAACCTGCGCCGGCGCCGCACCAGCGACGACGCGCTCGAGTTCGAGGCCGGCCACAAGGTCGGGGTGGAGGCCGAGGTGCTGCTGTCCGAGCGCCGAGGCGAGGTGCGCGCCGCGCTGGCCACGCTGCCCGCGGCCCAACGCGAAGCGCTCCTTCTGGCCTATTTTGGTGGGTACACGCAGCGCGAGGTTGCGAGTCTGGTAGGGGTCCCCCTGGGGACTGTCAAGACGAGGATGGCCGCTGGGATGCGCAAGCTCAAGGACGCCTTGAGCGAGCCTGGTCGGGAGGAGCAACGCCCGTGGACCAGGCAATGA
PROTEIN sequence
Length: 201
VRGAKAYRGLQDGQLVALVAEKDPDALEALYDRYGKVSYSLARRIMADATLAQDVVQEVFLSLWRDAHRFDAGRGTVATYLLSMTHHRAVDVVRREENLRRRRTSDDALEFEAGHKVGVEAEVLLSERRGEVRAALATLPAAQREALLLAYFGGYTQREVASLVGVPLGTVKTRMAAGMRKLKDALSEPGREEQRPWTRQ*