ggKbase home page

PLM3_127_b2_sep16_scaffold_3227_9

Organism: PLM3_127_b2_sep16_Hydrogenophilalia_Hydrogenophilales_63_16

near complete RP 44 / 55 BSCG 44 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(10479..10865)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein Tax=Verminephrobacter aporrectodeae RepID=UPI0002378533 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 128.0
  • Bit_score: 110
  • Evalue 6.50e-22
Exported protein {ECO:0000313|EMBL:EIK89331.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 129.0
  • Bit_score: 101
  • Evalue 5.60e-19
Putative extracytoplasmic tricarboxylate-binding receptor of a tripartite transporter, in cluster with DUF1446 similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 129.0
  • Bit_score: 98
  • Evalue 9.50e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
GTCGCCGGGCGCGTGCCGGTGATGGCCGTGGATGTCTCTGCCGTGCTCGGCCAGATCCGGGGAGGCAGCGTACGCCCGCTCGCCGTCACGTCGTTGAGGGAATCGCCCGTCCTGCCTGGCGTGCCGCCGCTCGCGGACACGATTCCCGGGTTCGAGCTCATCGTGTTTTTCGGCCTGTACGTTCCCAAGGGCACCGACCCGGCGATCGTCCAGGCGCTCTACCAGGCGGCGCGCGCCGCTGCCGAGCGCGAGGACTTCAAGCGCATCCTCGTCAGCCAGGGATTCGAGATCCGCACCAGCACCCCGGCCGAACTCGCCGCGTTCTCCGCGCGCGAGATCGAGCGCTGGGCGCAGATGGTGAAGGAAGCGAAGATCGATCCGGAGTAA
PROTEIN sequence
Length: 129
VAGRVPVMAVDVSAVLGQIRGGSVRPLAVTSLRESPVLPGVPPLADTIPGFELIVFFGLYVPKGTDPAIVQALYQAARAAAEREDFKRILVSQGFEIRTSTPAELAAFSAREIERWAQMVKEAKIDPE*