ggKbase home page

PLM3_127_b2_sep16_scaffold_95022_8

Organism: PLM3_127_b2_sep16_Hydrogenophilalia_Hydrogenophilales_63_16

near complete RP 44 / 55 BSCG 44 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 3275..3394

Top 3 Functional Annotations

Value Algorithm Source
Protein containing Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit (Fragment) Tax=mine drainage metagenome RepID=T1BZJ0_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 34.0
  • Bit_score: 63
  • Evalue 3.60e-08
Type I restriction-modification system restriction subunit {ECO:0000313|EMBL:EQD27466.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 34.0
  • Bit_score: 63
  • Evalue 5.10e-08
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 35.0
  • Bit_score: 55
  • Evalue 3.70e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 120
ATGAACTCCTTCACCGAGTCCGTCGTCGAGGACGCCGCGCTCGCCTGGCTGGAGTCACTCGGCTACGCAGTCCTGCACGGCCCCGACATCGCTGTCGGCGAGATCGACGTTCATGCTTGA
PROTEIN sequence
Length: 40
MNSFTESVVEDAALAWLESLGYAVLHGPDIAVGEIDVHA*