ggKbase home page

PLM3_127_b2_sep16_scaffold_2504_9

Organism: PLM3_127_b2_sep16_Betaproteobacteria_67_14

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(8438..10873)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor Tax=Thauera aminoaromatica S2 RepID=N6YXV3_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 820.0
  • Bit_score: 1052
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 820.0
  • Bit_score: 1049
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 823.0
  • Bit_score: 1322
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2436
ATGCACCGCGACTCGCCCCCCGCCCGCAGGCGCTATACCCGGCTAGCCGGCTCCTCGGATGCGCTTGCCCTGGCGCGGCTGGCGCACGACGAGAAGCCGCTCGCTGTCGTCAGCGCCACCGCCCTGGACGCGCAGCGCCTGGTCGACGAGCTCGCCTGGCTCGACCCCGGGCTGCGCCTCTGCCTGCTGCCGGACTGGGAAACGCTGCCCTACGACCAGTTCTCTCCCCACCAGGACCTGGTCTCCGAGCGCCTTGCCACGCTCTACCGCATCCAGCGCGGGGAGTTCGACATCGCCGTGGTCCCGGCCGCGACGGCGCTGGTGCGGCTATGCCCGCCCTCCTATATCGCGGCCCTCACGTTTTTCCTGAAGTCGAAGGAAAGGCTTGATCCGGCATCCATCAGGGAACAACTCGCGACCGCCGGCTACCAGCATGTGACGCAGGTGGTGGCGCCGGGGGAGGTCTGCTTCCGCGGCGGCCTGATCGACCTTTTCCCGATGGGCAGCAACCTGCCCTACCGCATCGACCTCGACGACGAGCTGATCGACACGATCCGCACCTTCGACGTCGACTCGCAGCGCACGCTCTACGCCGTCAACGAGATCCGGCTGCTGCCGGCGCGCGAGTTTCCGCTCGACGAGGCGGGGCGCTCGCGCTTCCGCAGCCGCTGGCGCGAGCTCTTCGAGGGCGACCCGTCGAAGAAGCGCCTCTACCGCGACATCTCCGGCGGCATCCCTGCGGCGGGCATCGAGTACTACCTGCCCCTTTTCTTCGAGTCGGTGGCGACGCTGTTCGACTACCTGCCCCGGGCCAGCACGCTGGTCCTGCACCGGGACGTGTCGAGCGCGGTCAACGAGTTCTGGCGCGACGCCACGCTGCGCCACCGCATGGCGGGCGGCGACCCGGACCGGCCGCTGCTCGCCCCGCCGCAGCTCTTCCTCCCGGCCGAGGAGTTTTTCGTCAAGGCGAAGGATTTCCCGCAGGTTGATTTCCTCGCACCGGAAGGCGAAGAAAACCGCATCCCTTCCGTTGCAGTGGACCGGCGCGCGCAGGACCCGCTCGCTGCGCTCAAGCGCTTCCTCGACACCTCGGGTTTGCGGGTCCTGGTCGCCGCCGAGTCGCCGGGGCGGCGAGAAACCATGGCTGCTTATTTTGCCGAATACGGACTGAAAGCGGAAGCTATCGGGGAGTTCAAGGATTTCATTTCTTCCCCGGCACGATTCTGCCTGGCGGTCAGTCCGCTCGCGCTGGGCTTTACCGTCCCGGCCGAGGGCTGGGCGGTCGTCACGGAAGCCGAGCTCTACGCCGGCGTGGTGCGGCAGCGGGTTCGCGCAACGGAGAAGCGCAGCTCGGTCGAAGGCATGCTGCGCGACCTGTCGGAGCTCAAGGTCGCCGACCCGGTGGTGCACGAGCAGCACGGCATAGGCAGATACCTGGGGCTGCAAAAAATGACTTTCGAGGAAGGCGAGAGCGAGTTCCTGATCCTTTCCTACCAGGGCGGAGACAAGCTTTACGTGCCGGTGTCGCAGCTCGGCGTGATCGGGCGCTACAGCGGCGCGCAGCCCGAGGAGGCGCCGCTCCACAAGCTCGGCAGCGGGCAATGGGACAAGGCCAAGGCGCGCGCGGCGAAGCAGGTGCGCGACACCGCGGCGGAGCTGCTCGCGCTCTACGCGAAGCGCGCGGCGCGGCACGGCCACGCGTTCGGCATCCGGCAGCACGACCTCGAGGCCTTCGCCGAGGGCTTCGGCTTCGAGGAAACGCCCGACCAGGCGCACGCCATCGAGTCGGTGATCGCCGACATGGCCGCGGGCAAGCCGATGGACCGCCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTCGCGCTGCGCGCCGCGTTCGCCGCGGTGGCCGACAGCAAGCAGGTCGCGGTGCTCTGTCCCACCACGCTGCTCGTCGAGCAGCATTTCCAGACCTTCTCCGACCGCTTCGCCGACTGGCCGGTGAAGGTAGCGGAGCTCTCCCGCTTTAGATCTTCAAAAGAAAGTATCGAGATTGTGAGGAAGCTGGCAAGCGGCGAGATCGACATCGTCATCGGCACGCACAAGCTGCTGTCGAAGGAGCTGAAGATCTCGCGCCTCGGGCTGGTGATCATCGACGAGGAGCACCGCTTCGGCGTGCGGCAGAAAGAGGCGCTGAAGCGCCTGCGCACCGAGGTGGACGTGCTGACCCTGACCGCCACGCCGATCCCGCGCACCCTCGCCCTGTCGTTGGAAGGAATTCGCGATTTCTCCGTGATCGCCACCGCCCCGGAAAAGCGGCTCGCCATCAAGACCTTCGTCGCGCCCTGGTCCGAGGGCCTGATCCGCGAGGCCGTGATGCGCGAGCTCAAGCGCGGCGGCCAGGCCTTCTTCCTGCACAACGAGGTGGACAGCATCGAGCGGAGCGGGTGA
PROTEIN sequence
Length: 812
MHRDSPPARRRYTRLAGSSDALALARLAHDEKPLAVVSATALDAQRLVDELAWLDPGLRLCLLPDWETLPYDQFSPHQDLVSERLATLYRIQRGEFDIAVVPAATALVRLCPPSYIAALTFFLKSKERLDPASIREQLATAGYQHVTQVVAPGEVCFRGGLIDLFPMGSNLPYRIDLDDELIDTIRTFDVDSQRTLYAVNEIRLLPAREFPLDEAGRSRFRSRWRELFEGDPSKKRLYRDISGGIPAAGIEYYLPLFFESVATLFDYLPRASTLVLHRDVSSAVNEFWRDATLRHRMAGGDPDRPLLAPPQLFLPAEEFFVKAKDFPQVDFLAPEGEENRIPSVAVDRRAQDPLAALKRFLDTSGLRVLVAAESPGRRETMAAYFAEYGLKAEAIGEFKDFISSPARFCLAVSPLALGFTVPAEGWAVVTEAELYAGVVRQRVRATEKRSSVEGMLRDLSELKVADPVVHEQHGIGRYLGLQKMTFEEGESEFLILSYQGGDKLYVPVSQLGVIGRYSGAQPEEAPLHKLGSGQWDKAKARAAKQVRDTAAELLALYAKRAARHGHAFGIRQHDLEAFAEGFGFEETPDQAHAIESVIADMAAGKPMDRLVCGDVGFGKTEVALRAAFAAVADSKQVAVLCPTTLLVEQHFQTFSDRFADWPVKVAELSRFRSSKESIEIVRKLASGEIDIVIGTHKLLSKELKISRLGLVIIDEEHRFGVRQKEALKRLRTEVDVLTLTATPIPRTLALSLEGIRDFSVIATAPEKRLAIKTFVAPWSEGLIREAVMRELKRGGQAFFLHNEVDSIERSG*