ggKbase home page

PLM3_127_b2_sep16_scaffold_22291_2

Organism: PLM3_127_b2_sep16_Betaproteobacteria_67_14

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(2554..3285)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZW8_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 277.0
  • Bit_score: 227
  • Evalue 9.10e-57
bifunctional XRE family transcriptional regulator; shikimate kinase similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 277.0
  • Bit_score: 227
  • Evalue 2.60e-57
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 243.0
  • Bit_score: 355
  • Evalue 3.10e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGACCGAAACCCTCTACCTCTCCCGCCTCGGCGAACGCGTGCGCGCGTGGCGCACCGAGCACGCCATGACCCGCAAGGCGCTCTCCGCGGCGAGCGGCGTGTCCGAGCGCTACCTCGCGCAGCTCGAGGCCGGCGAGGGAAACATCTCGGTGCTGCTGCTGCGCAAAGTGGCCCGCGCCATGGGTGTCCCCGTCGAGAGCCTGGTGCGCGAGGAAGAACTCCAGGAAAAATCCATTGCCCTCATTGGGCTGCGCGGCGCCGGGAAATCGACGCTGGGGACCAAGCTCGCCGGGCAGATGAGCATTCCCTTTGTGGAGCTCGATCGGGAAGTCGAAAGGGAAGCCGGCGCCGCGCTGGGCGAAGTGTTCGCCCTCTACGGCCAGGAAGCCTTCCGCCGCTTCGAGCGCCGCGCGCTCGAGCGCGTGCTCGCGCAGAACGAGCGCGCGGTGATCGCCGCCGGCGGCTCGCTGGTCACCGACCCCTCGACCTACCAGCTCCTCCTCGACCGCTGCCAGTGCGTCTGGCTCAAGGCGTCGCCGGAAGAGCACATGTCGCGCGTCATCGCGCAGGGTGACATGCGTCCTTTCAAGGGCCGGTCCGCTGCTTTGGGGGAAATCAGGAAATTATTGGAACATCGGGATAAGCTCTACGCTCGCGCCGGTTTCACGATTGACACCTCGGGCAAGCCCGTGCGGCAAAGCCTGGCCGAACTCAGGAAAACCATCTCATGA
PROTEIN sequence
Length: 244
MTETLYLSRLGERVRAWRTEHAMTRKALSAASGVSERYLAQLEAGEGNISVLLLRKVARAMGVPVESLVREEELQEKSIALIGLRGAGKSTLGTKLAGQMSIPFVELDREVEREAGAALGEVFALYGQEAFRRFERRALERVLAQNERAVIAAGGSLVTDPSTYQLLLDRCQCVWLKASPEEHMSRVIAQGDMRPFKGRSAALGEIRKLLEHRDKLYARAGFTIDTSGKPVRQSLAELRKTIS*