ggKbase home page

PLM3_127_b2_sep16_scaffold_23158_4

Organism: PLM3_127_b2_sep16_Betaproteobacteria_67_14

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(2859..3620)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 253.0
  • Bit_score: 339
  • Evalue 2.90e-90
oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 252.0
  • Bit_score: 325
  • Evalue 7.20e-87
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 249.0
  • Bit_score: 382
  • Evalue 3.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGCATCCCAGAGAGTCGCGCTCGTAACGGGCGCCGGCAGCGGCATCGGCAAATCGGCGGCCCTCGCGCTGCTCAAGGACGGCTACCGCGTGGCGCTCGTGGCGCTGGTCGGCCGGCGCAAGGACATGCTCGAGAAAGCCGCCGCCGAGTCCGGCGCCAAGGACCGCGCGCTCGTCCTGCCGGCGGACATTACTGTCGATTCTGAAGTCAAAAAAATATTTGCTGAATTGAAGGCGAAGTGGGGTCGCCTCGACGTGCTGTTCAACAACGCCGGCATCGGCGCCCCCGCGGTGCCGATGGAAGACCTGCCGATCGAGAAATTCCGCGAGGTGGTGAACATCAACCTAATCGCGATGTTCATGTGCACCCAGGAGGCGATCCGCATCATGAAGGCGCAGAGCCCCAAGGGCGGCCGCATCATCAACAACGGCTCGATCTCCGCCCACGCGCCGCGGCCCATGTCGGTCGCCTACACTTCCACCAAGCACGCCGTCACCGGCCTCACCAAGTGCATCTCGCTCGACGGCCGCAAGCACGACATCGCGGCGAGCCAGATCGACATCGGCAACGCGCTCACCGACCTCGCCGCGCGCATGGCGCAGGGCGTGCCGCAGGCCGACGGCTCGGTCAAGCCCGAGCCGCTGATGGACGTGGCGCATGTCGGCGCCGCGGTGCTGCACATGGCCAACCTGCCGCTCGAAACCAACGTGCAGTTCATGACCATCATGGCCACCAAGATGCCCTTCGTCGGGCGGGGATGA
PROTEIN sequence
Length: 254
MASQRVALVTGAGSGIGKSAALALLKDGYRVALVALVGRRKDMLEKAAAESGAKDRALVLPADITVDSEVKKIFAELKAKWGRLDVLFNNAGIGAPAVPMEDLPIEKFREVVNINLIAMFMCTQEAIRIMKAQSPKGGRIINNGSISAHAPRPMSVAYTSTKHAVTGLTKCISLDGRKHDIAASQIDIGNALTDLAARMAQGVPQADGSVKPEPLMDVAHVGAAVLHMANLPLETNVQFMTIMATKMPFVGRG*