ggKbase home page

PLM3_127_b2_sep16_scaffold_1219_30

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 32641..33216

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4D4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 190.0
  • Bit_score: 275
  • Evalue 3.00e-71
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 191.0
  • Bit_score: 278
  • Evalue 1.30e-72
30S ribosomal protein S1 {ECO:0000313|EMBL:AHK79162.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 191.0
  • Bit_score: 278
  • Evalue 6.50e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGCAGGGCCAGATCAAATCGATCACCGATTTTGGCATCTTCATCGGCCTGGCGGGGGGCATCGACGGCCTGGTGCACCTGTCCGATATCTCCTGGGACGTGCCGGGCGAAGAGGCCGTGCGCAACTTCCAGAAAGGCCAGCAGATCGAGGCCATGGTGCTGTCGATCGATCCGGAACGCGAACGCATCTCGCTCGGGATCAAGCAGCTCGCCAAGGATCCGTTCTCGGGCTTCCTGGCGGAGCATCCGAAGGGCAGCATCGTGAAGGGCGTGGTCAAGGATGTGGATGCCAAGGGCGCCATCATCGACCTCGGCAATGGCGTGGAAGGCAACCTGCGTGCTTCGGAGCTGTCGCGTGATCGCGTCGAGGATGCACGCGCGGTGCTCAAGATCGGCGACGAGGTGGAAGCCAAGTTCACCGGCGTCGATCGCAAGGGTCGAACCATCGCGCTGTCGATCAAGGCCAAGGAAGCGCACGACGAGGCGGAGGCGGTGCAGAACTACAAGACCACCGAAGCGTCCTCGGGCACGAGCCTGGGTGATTTACTCAAGGAGCACATCGGCGGACAGGACTGA
PROTEIN sequence
Length: 192
VQGQIKSITDFGIFIGLAGGIDGLVHLSDISWDVPGEEAVRNFQKGQQIEAMVLSIDPERERISLGIKQLAKDPFSGFLAEHPKGSIVKGVVKDVDAKGAIIDLGNGVEGNLRASELSRDRVEDARAVLKIGDEVEAKFTGVDRKGRTIALSIKAKEAHDEAEAVQNYKTTEASSGTSLGDLLKEHIGGQD*