ggKbase home page

PLM3_127_b2_sep16_scaffold_6980_1

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 65..1075

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator TetR family Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DD13_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 314.0
  • Bit_score: 211
  • Evalue 7.10e-52
type I secretion protein TolC similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 298.0
  • Bit_score: 205
  • Evalue 1.90e-50
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 291.0
  • Bit_score: 214
  • Evalue 1.50e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAGCGGACGCACTCGTGTTTGGATTGGCTTGGTGACTGCCCTGCTGGCTGCACAAATCACGCAAGGCGCTGATTTACTTCAGGTTTACCAGCGGGCCGCGCAGAACGACCCGCTCATCCGCGAGGCTGAGGCCATCCGCCTCGCGGCGCGCGAATCAAAGCCCCGGGCCCTGAGCGCCCTGCTCCCGCAGATCGGCGCCAGCGGCACCCTCGGCCAGCAAGAGTCCGACGGCTCGCAGACCTTTCTCACCCAGATCCTCAACCAGCCAACACAGATCAATACCACCAACCAGGAAACCGACGCCGATTTCACCCAGTACCAGCTGCAACTCATCCAATCCGTGTTTCGCTGGGATCAGTGGGTGGCACTGAAGCAGGCCAGTTCGCAGGTCGCTCAGGCCGAAGCGAACTACGCGGCCGCACAACAAGACCTCATGCTCCGCGCCGCGCAGCGGTACTTCGATGTGCTCGCGGCTGAAGACACGCTGCAATCCGTCACTACCGCACGCGATGCGATCGCCCGCCAGCTCGAGCAGGCAGACAAGCGATTCGAAGTGGGCTTGATCGCGATCACCGACGTGCAGGAAGCTAAAGCCGCGTACGACAATGCCACTGCGCTCCTGATCCAGTCGAAGCGCAACCTGGCCACGTCGCACGAGCTGTTGCGCGAATTGACCGGCGATCCGTTCCAGTCGCTCGCCAAGCTGTCGGAGTCGATGCCACTCAAGTCTCCGGACCCGCAGGATGAAAACGAATGGGTCAAGACGGCCATGGAGCAGAATCTGGCACTGACGGCAAGCCGCCTCGCCGCCGACATCGCGCGCGACACGATCTCGATCCGGCGCTCGGGCCACCTGCCCTCTCTCGACCTCGTGCTGTCGCGCACCGGTTTCGACGCGGATGTCACGCAGATCGTGAGCGCCTTGAGCGCACTGCGCGCGAGACGGAGCGCGAGACGCGCGACGCGTACCTGGGTGTGTTGTCAGAGCTTTCGCGCGTCCAAGCTTTGA
PROTEIN sequence
Length: 337
MSGRTRVWIGLVTALLAAQITQGADLLQVYQRAAQNDPLIREAEAIRLAARESKPRALSALLPQIGASGTLGQQESDGSQTFLTQILNQPTQINTTNQETDADFTQYQLQLIQSVFRWDQWVALKQASSQVAQAEANYAAAQQDLMLRAAQRYFDVLAAEDTLQSVTTARDAIARQLEQADKRFEVGLIAITDVQEAKAAYDNATALLIQSKRNLATSHELLRELTGDPFQSLAKLSESMPLKSPDPQDENEWVKTAMEQNLALTASRLAADIARDTISIRRSGHLPSLDLVLSRTGFDADVTQIVSALSALRARRSARRATRTWVCCQSFRASKL*