ggKbase home page

PLM3_127_b2_sep16_scaffold_7952_2

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1498..3315)

Top 3 Functional Annotations

Value Algorithm Source
squalene-hopene cyclase (EC:5.4.99.17) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 612.0
  • Bit_score: 521
  • Evalue 1.60e-145
Putative squalene-hopene cyclase Tax=Chthoniobacter flavus Ellin428 RepID=B4CTZ7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 594.0
  • Bit_score: 587
  • Evalue 1.50e-164
Putative squalene-hopene cyclase {ECO:0000313|EMBL:EDY22035.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 594.0
  • Bit_score: 587
  • Evalue 2.10e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1818
ATGAGCGAAGACGCCGGCGCGCTTGACCGAACGATCGACACGCTCACCGCGCGTCTGCTCGAGCGCAGGACCGCCGGCGGCCATTGGGAGGGACGCCTCGCGAGCAGCGCGCTCTCGACGGCAACGGCAACGGTCGCCTTGATGCTGGAACAGCGCGCCTCCGGCCACGACCGCCGCTCGCTGATCCGCTCCGGTCTCGCCTGGCTCGTCGCTAATCAGAACACTGATGGGGGGTGGGGCGACACGGTCGTCAGCTTCACCAACCTCAGTACGACGGTGCTGTGCTGGTCGGCGTTGAGCCTCTGTGTTGATGCACATGAATCAACGCGGACCGCCATCGAGCGGGCCGAGTGCTGGCTCGCCAAGCAGGTCGGCGACCTGAGCGCCGCGTCGCTGAAGCGCGCGATCATTGCGCGGTACGGAACGGATCGCACCTTTTCAGCCCCGATTCTGACGGTGCTGGCGCTCGCCGGAAAGCTCGGTGCAGGCGCTGAGGCGTGGCGGCTGGTCCCGCAGCTGCCCTTCGAGCTGGCTGCCTGCCCGCATCAGTGGTTCCGATGGATGCGGCTACCGGTCGTCAGCTATGCGCTGCCGGCGCTGGTCGCGATCGGCCAGGTACGTCATCGTCACGCGCCGACACGCAACCCGCTGTTCGCGCCGCTCAGATCTGCGCTTCGATCGCGCACCCTGCGGGTCGCACGCGAGATGCAACCCGAGAGCGGCGGCTATCTGGAGGCGGTCCCGTTGACGGCGTTCGTCGTGATGAGCCTCGTCTCCGCCGGAGCGGCGGACGACGGCATCGTTGCACATGGAATTCGATTCCTGATCGCGTCGGCCCGCGCAGATGGAAGCTGGCCAATCGATACGAATCTCGCTACCTGGGTCACGACCCTCTCGGTAGGAACTCTGGCGCCCAACGACTGGCTCCCGGACGAGGACCGCCGGCGCATCCTGCAGTGGCTGCTCAATCAGCAGGTCGCGCAGGAGCACCCGTTTACGCACGCGAAGCCTGGCGGATGGGCGTGGACAGACCTCGCCGGTGGCGTGCCCGACGCTGATGACACCGCGGGCGCGCTGCTGGCGATCTGGACCCTGGGTGGGGTAACGCAGCTCAATGCGGCCGTTGCCGGCATCGGGTGGCTGCTCGACCTGCAGAACAGCGACGGCGGCATCCCGACGTTCTGTCGAGGATGGGGCGTGCTGCCGTTCGATCGGAGCGCGCCGGATCTGACGGCGCACGCGCTCGAGGCCTGGAGTATCTGGTATCCCGCGGTCGCTCCCGATCTGCAGCGCCGGATTTCTGACGCTGCGGAGCGTGGCGCGTTGTACCTCGCGCACGATCAGCGGCCAGACGGAAGCTGGGCGCCTCTGTGGTTTGGAAACCAGCACGTAGCAGGCGAGGTCAATCTGACCTACGGGACAGCCCGGGTCATTGGCGCGCTCGCCGCCACGCTCGCGCGTGACGCGCCCGCCACCCAGCGCAGCCTCCACCGTGGCATCACATGGCTGCTGGACGCCCAGAACTCGGACGGCGGCTGGGGCGGGGCCGACGGCGCACCCTCGTCCATCGAGGAGACGGGCGTCGCGCTGCACGCCCTGGGCAGAAGTGGGGATCATCCATCTCCTCCACTGGCCGACGCGATGCGCCGCGGCGTGCGATGGCTCCTCGCCGCGACCGAAGAAGGCCGGCGGACGCCTGCCTCGCCGATCGGCTTGTACTTCGCGCGCCTGTGGTATTACGAAGAGCTGTACCCGCTCGTGCTCGGTCTAAAGGGATTGGCACAGGTGCGTGCCGCTATGGCGTTGACACCCTCATGA
PROTEIN sequence
Length: 606
MSEDAGALDRTIDTLTARLLERRTAGGHWEGRLASSALSTATATVALMLEQRASGHDRRSLIRSGLAWLVANQNTDGGWGDTVVSFTNLSTTVLCWSALSLCVDAHESTRTAIERAECWLAKQVGDLSAASLKRAIIARYGTDRTFSAPILTVLALAGKLGAGAEAWRLVPQLPFELAACPHQWFRWMRLPVVSYALPALVAIGQVRHRHAPTRNPLFAPLRSALRSRTLRVAREMQPESGGYLEAVPLTAFVVMSLVSAGAADDGIVAHGIRFLIASARADGSWPIDTNLATWVTTLSVGTLAPNDWLPDEDRRRILQWLLNQQVAQEHPFTHAKPGGWAWTDLAGGVPDADDTAGALLAIWTLGGVTQLNAAVAGIGWLLDLQNSDGGIPTFCRGWGVLPFDRSAPDLTAHALEAWSIWYPAVAPDLQRRISDAAERGALYLAHDQRPDGSWAPLWFGNQHVAGEVNLTYGTARVIGALAATLARDAPATQRSLHRGITWLLDAQNSDGGWGGADGAPSSIEETGVALHALGRSGDHPSPPLADAMRRGVRWLLAATEEGRRTPASPIGLYFARLWYYEELYPLVLGLKGLAQVRAAMALTPS*