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PLM3_127_b2_sep16_scaffold_45566_4

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3382..3918)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 171.0
  • Bit_score: 135
  • Evalue 6.30e-29
Putative 2'-5' RNA ligase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BS9_METCA similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 171.0
  • Bit_score: 135
  • Evalue 4.50e-29
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 171.0
  • Bit_score: 135
  • Evalue 1.30e-29

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Taxonomy

Methylococcus capsulatus → Methylococcus → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCCGATGAGCCAAGAGCGCGCCGACTGTTCTTCGCCATCTGGCCCGACGAGCCCGTGCGCACGGCGTTCGCGCATGCGACCCGCAAGGCAGTACGGGCGAGTGGCGGGAGACCGATCCCGGTCTCCAATCTGCATTCGACGGTGGCATTCCTCGGACCGGTGCCCTCCGAACGGATTCCATTGGTGATGGCGGCCGCGGCCGGGCTAAGTCATCCGCCCTTCGAGCTGAGCTTTGACCGGCTCGAGCAATGGCCAAAGCCCGCCATCCTCTGTGCGATCTGCAGCCGACCCCCGCCCGCCGCCGCCGAACTCGCCTCCGTCCTCTGGAAGCTCTTGGCCAGGCAGGGATTTGCTCCTGACCTCAAGCCGTACCGGCCGCACGTGACGCTCGCGCGAAAGGTTGCCAAGCCGCATGCGATCGGAGCGCTTCACCCTGTGATGTGGCGGGTGGATGGGATTGCACTGGTCGAGTCCGTCACCGACCCCGAGGGTTCGCTGTACACGGTGCTCGAGAGCTGGTCGCTGCACGCGTGA
PROTEIN sequence
Length: 179
MADEPRARRLFFAIWPDEPVRTAFAHATRKAVRASGGRPIPVSNLHSTVAFLGPVPSERIPLVMAAAAGLSHPPFELSFDRLEQWPKPAILCAICSRPPPAAAELASVLWKLLARQGFAPDLKPYRPHVTLARKVAKPHAIGALHPVMWRVDGIALVESVTDPEGSLYTVLESWSLHA*