ggKbase home page

PLM3_127_b2_sep16_scaffold_2974_26

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 23711..24622

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 302.0
  • Bit_score: 346
  • Evalue 2.30e-92
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 296.0
  • Bit_score: 228
  • Evalue 1.90e-57
tRNA pseudouridine synthase B Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKK6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 296.0
  • Bit_score: 228
  • Evalue 6.60e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Entotheonella sp. TSY2 → Candidatus Entotheonella → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGCTTAGTGGTATCCTTAACCTTGATAAGCCGCGAGGTATGACATCGCATGATGTAGTCGCTGCGGTGCGTCGCATCCTGGGGATACGTGCAGTCGGCCACACAGGGACACTCGATCCAGAAGCAAGCGGGGTTTTGGTGCTTTGTCTTGGCGAGGCAACCCAATTTGCGCGTCTTTTTGAAACGCTGGAGAAAACGTATTGGACAGTTTTACAATTGGGCGTATGTACAGATACACAGGACGCAACGGGCACGGTGACATGCCAGCGTGAGGTACCCCCTTTCACACACGCGCAGCTCCGCGACGTCTTAGAGCGTTTTCAAGGTCCATTGCAGCAAATACCTCCTATGTATTCCGCCGTGAAGTATCGTGGACAACGCCTCTATCGTCTCGCCCGACAAGGCAAAACTGTTACGCGCCAAGCGCGTGATATTTTCGTACGGCGTCTTGATCTCCTGGATCAACGTGAGACGCAAATCACACTCAGTGTCACATGCTCAAAAGGCACTTATATCCGTACCTTAGGCGAAGATATTGGCCTCGCGTTGGGGTGTGGAGCGCACGTGTTGCATCTCCAGCGTTGTTGTGTAGGCCATTTTTCTCTACAAGGTGCGTGCTCGCTGCATGTTTTACAACAACAGATGCGCGCAGGGACCTTGTCACACGTGCTCATGCCTGTCACAGAAGCCTTGTCCTTTTTGCCATCGTTCATGCTGACAGCACAACAATATGACGCGCTTCGCCTAGGGCAGGGGAGAGCGCTTTCTACCATTCTTGACACCCTACAGCCTTTGCCTCAACATGCTTCTGGTTACCGTTTGTGTATACCACCGCAGAGGACTGTCGCAGTCATTCAACGGCAATTATCTCCTCCAGACAGATGGAAATGGAAATTGTATGTGCCTCCATAG
PROTEIN sequence
Length: 304
MLSGILNLDKPRGMTSHDVVAAVRRILGIRAVGHTGTLDPEASGVLVLCLGEATQFARLFETLEKTYWTVLQLGVCTDTQDATGTVTCQREVPPFTHAQLRDVLERFQGPLQQIPPMYSAVKYRGQRLYRLARQGKTVTRQARDIFVRRLDLLDQRETQITLSVTCSKGTYIRTLGEDIGLALGCGAHVLHLQRCCVGHFSLQGACSLHVLQQQMRAGTLSHVLMPVTEALSFLPSFMLTAQQYDALRLGQGRALSTILDTLQPLPQHASGYRLCIPPQRTVAVIQRQLSPPDRWKWKLYVPP*