ggKbase home page

PLM3_127_b2_sep16_scaffold_106287_1

Organism: PLM3_127_b2_sep16_Tectomicrobia_60_8

near complete RP 45 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: 1..1272

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HGS0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 430.0
  • Bit_score: 198
  • Evalue 7.90e-48
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48582.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 430.0
  • Bit_score: 200
  • Evalue 2.90e-48
peptide/oligopeptide/nickel ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 31.4
  • Coverage: 433.0
  • Bit_score: 198
  • Evalue 2.20e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ACCCTACAGCCCAACGCCAAATTTGCCAACGGTGATCCCATCAATGCCCAGGCGCTGAAGGAGTCGTATGCCTGGTTCCTGGGGGCGCGTGGCTCCGGACAGCTCAGGGTCAACGGTCTGCCCAGTGCCGAGCGCATTGAGGTAGTCGATGACAGGACCGTGCGCCTGCATCTCGACCGCCCGGTGGCATGGGGGCTCATCGGCAATGCCCTCCTGAGCAGTAGTAGTATTATACACGCCAAGGCGGTCATGCAACACGCCACCACAGACGATCCCTATGGGACCAAGTGGTTAGAGACCAAGACGATCGAATCGGGGCCCTTTATCATCGAGACCTGGCAAAAAGGCTCGATGATGAGTCTCGTACCGAACCCCCATGCTTTCCAATCCTCCAAACTCGAACGCATTATCCTGCAGGTCGTGCCTGATGCGTCCACCCGGCGCCTTGTCCTGGAGCGCGGGGATGTCGATTTTGCCGTGCAGATTGCCACCAAGGACATCCCGGACCTGCGCAAAGTCCCTGGCGTCAAGGTCGCCTCGTACCCCAGCGCCCGTGGCTGGTGGTTGGGGATGACGTGGCGCAAAGAACCGTTCAACAATATCCACTTCCGCCGTGCCATGGCGTGGGCCATGCCCTATGAAACGCTGCTCCAGGTCGTCACGCAGGGGCTGGCCGAGCGGGCACGCAGCTGTGTGCCGAACAATATCAGTGGGTACACGGGGGATTTCTGGCCGTATGAAACTAGTCTAGAGAAAGCCCGTGAGGAACTGGCGCAGGCGCAGGTGCCTGACGGCTTCTCGGTCACCGTACCTGTCTATGCTGGCGACCTGTTCGACGAAGAAGCGACCGTGCTGATCAAGGAGAGCCTGGCGCAACTCGGCATCAAGCTCACCCTTCAGAAAATGCCGATCAATCAAAAACGCACCCTCTTGACGCAGAAACAGGTCGATATGGCGGTCTATGATTGGCGTCCCTGGGTGCCCGATGCCGGCTACTTCATCTACTGGAACTGGCTCCCGGACAGCTTCACCAACTACTGGAGCTATGTCAATCCCGAGGCCCAGACGCTCGGCAATGAGGCCATTACCATGGCCGTAGGCTCGCCGGAGCGCAATGCCAAACTGCGGCGGTTTCAGGAAATTGTCAATGGCGATATCGGTCTGGTCCCCCTCTTTACCCAGTTCGACAACATCGTCACGCGGGAGAATGTGCAGGGCTATGTGTATTACCCCGATACGGTACCGGTGCTCGCCAAGATGAGCCTGGGGTAG
PROTEIN sequence
Length: 424
TLQPNAKFANGDPINAQALKESYAWFLGARGSGQLRVNGLPSAERIEVVDDRTVRLHLDRPVAWGLIGNALLSSSSIIHAKAVMQHATTDDPYGTKWLETKTIESGPFIIETWQKGSMMSLVPNPHAFQSSKLERIILQVVPDASTRRLVLERGDVDFAVQIATKDIPDLRKVPGVKVASYPSARGWWLGMTWRKEPFNNIHFRRAMAWAMPYETLLQVVTQGLAERARSCVPNNISGYTGDFWPYETSLEKAREELAQAQVPDGFSVTVPVYAGDLFDEEATVLIKESLAQLGIKLTLQKMPINQKRTLLTQKQVDMAVYDWRPWVPDAGYFIYWNWLPDSFTNYWSYVNPEAQTLGNEAITMAVGSPERNAKLRRFQEIVNGDIGLVPLFTQFDNIVTRENVQGYVYYPDTVPVLAKMSLG*