ggKbase home page

PLM3_127_b2_sep16_scaffold_2305_7

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: 5416..5559

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L34 Tax=Nitratiruptor sp. (strain SB155-2) RepID=RL34_NITSB bin=16ft_combo_ws3_JS1 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 47.0
  • Bit_score: 92
  • Evalue 1.20e-16
50S ribosomal protein L34P similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 44.0
  • Bit_score: 75
  • Evalue 3.20e-12
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 47.0
  • Bit_score: 92
  • Evalue 1.60e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 144
ATGAAGCGCACCTACCGACCCCGCAACCGCCACCGGAAGAAGACCCACGGCTTCCGCGCGCGGATGAAGACCAAGGGCGGACGCAAGGTGATCGCCGCCCGCCGCAAGCAGGGCCGCAAGCGCCTCACCGTCTCCTCGGCATAG
PROTEIN sequence
Length: 48
MKRTYRPRNRHRKKTHGFRARMKTKGGRKVIAARRKQGRKRLTVSSA*