ggKbase home page

PLM3_127_b2_sep16_scaffold_8232_2

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(363..1667)

Top 3 Functional Annotations

Value Algorithm Source
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 414.0
  • Bit_score: 279
  • Evalue 1.00e-72
Diaminopimelate decarboxylase Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6Y1_9PROT bin=16ft_combo_ws3_JS1 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 423.0
  • Bit_score: 561
  • Evalue 4.70e-157
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 423.0
  • Bit_score: 561
  • Evalue 6.70e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAAGGTGGTCGAGGGGATCTCCCGTGAGGGCGGGGCACTCGCGCTCGGCGGCATGCCGCTCGATCGCGTGCTCGCGGCGCTGCGGCGGCTGGAGCCGGCCGCCTCGGCCTGCTGGGTCTATGACCTCGACCAGGTCGAAGCGCGCGCGACTCGCTTCAAGTCCGCTTTCGCCCCTCTCGGCGTCCACGTCGGCTACGCGCTCAAGGCCAATGCGCTGCCCGCGATCCTCAGGCGGGTGCGCGCGGTCGGACTCGCCGCCGAGGCCGGCTCGCTCGGCGAGCTGGTCGCAGCACGGCACGAGGGGTTCGTCGCGGGGGAGAGGATCCTCAACGGCAACGGCCGGACGCCGCAGGAGGCCGAGTTCGCGGCGCGGGAAGGCGTGCACTCGGTCAATGCCGACCACATCGAGGAGCTGGATCTGCTGCAGGCGCACGCGGCCCGGGCGAACACGGTGGTCAGGGTCGCGTTGAGGGTGAACCCCGGAATCGACACGCACGGGCACGCCTACGTCGCGACCGGCCACGACGAGGCCAAGTTCGGCGTGGCGCCGGGCGAGGCGCTGGAGGCATGGGCGGGGCGCGATCGCTGGCCGAGCCTCCGCGTGGATGGTGTCCACCTGCACGTGGGCTCGCAAGTCCTCGAACCCGGCCCGCTCGAACGGGCCGCCGACACCGCGCGCGAGTTGGCGGAGGAGTCCGCGCGCCGCGGCGCGCCGCTCGGCCTGGTCAACCTGGGCGGCGGGTTCGGCGTGGACTATTCGGGCGAGGGCGCGGAGTTCCCGCTCGAGGCGTACGCCGCGCGGCTCGCGCGGAAGATGGCTGAGCTGGGGGTCGAGTGGGTAATGGAGCCCGGCCGCTGGCTGGTCGCTCCGGCCGGGGTGCTGCTCGCCGAGGTCCTGTGGGTCAAGCGGCGCGGTGGCGCGAACGGCGGAGGCGCGCGGCGCTTCGTTGTGCTCGCCGCCGGCATGAACGACCTGATCCGGCCCGCGCTCTACGGCGCGCGCCATCGCATCGTGCCGGTGCGGCCGCGCGCGGGCGCGGAGGAGCCGGCCACGGTCGTGGGCCCGGTGTGCGAAAGCGCCGACGTCTTCGAGCGTGACGCGATGCTGCCCCCGCTCGAGCGTGGCGACCTGGTGGCCCTCCTCGACGCCGGGGCGTACGGCGCGGTCATGTCCTCCAACTACAACGGCCGCGGGCGCCTCGCGGAGGTGACCGTGAGCGGCGGGCGCCTGACCCGCGCGCGGGCGGGGGAGGATGCGGCGACGGTGGGGGCGCGGGAGGTGGAGGAGAGGCTGGAGAACTGA
PROTEIN sequence
Length: 435
MKVVEGISREGGALALGGMPLDRVLAALRRLEPAASACWVYDLDQVEARATRFKSAFAPLGVHVGYALKANALPAILRRVRAVGLAAEAGSLGELVAARHEGFVAGERILNGNGRTPQEAEFAAREGVHSVNADHIEELDLLQAHAARANTVVRVALRVNPGIDTHGHAYVATGHDEAKFGVAPGEALEAWAGRDRWPSLRVDGVHLHVGSQVLEPGPLERAADTARELAEESARRGAPLGLVNLGGGFGVDYSGEGAEFPLEAYAARLARKMAELGVEWVMEPGRWLVAPAGVLLAEVLWVKRRGGANGGGARRFVVLAAGMNDLIRPALYGARHRIVPVRPRAGAEEPATVVGPVCESADVFERDAMLPPLERGDLVALLDAGAYGAVMSSNYNGRGRLAEVTVSGGRLTRARAGEDAATVGAREVEERLEN*