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PLM3_127_b2_sep16_scaffold_10960_2

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(1127..1408)

Top 3 Functional Annotations

Value Algorithm Source
hupB; transcriptional dual regulator HU-beta; K03530 DNA-binding protein HU-beta bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 93.0
  • Bit_score: 164
  • Evalue 4.70e-38
hupB; transcriptional dual regulator HU-beta similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 92.0
  • Bit_score: 122
  • Evalue 5.80e-26
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 93.0
  • Bit_score: 164
  • Evalue 6.60e-38

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 282
ATGGGCAAGATGATGACCAAGTCCCAGGTCGCGGGGCACATCGCGGGCAAGTTCGAGATCACCAAGAAGCAGAGCGTGGAGATCCTCGAAGAGCTGGCGACACTCGCCGCCAAGCAGGCCAGGAACGGGTTCGTGTTCCCCGGTGTGGGCAAGCTCGTGGTGGTGAAGCGCAAGGCGCGCATGGGCCGCAACCCGCAGACCGGTGAGGCCATCAAGATTCCGGCCAAGACCGTCCTGAAGTTCCGCATCGCCAAGGCGATGAAGGAGTCGGCCCTCAAGTAG
PROTEIN sequence
Length: 94
MGKMMTKSQVAGHIAGKFEITKKQSVEILEELATLAAKQARNGFVFPGVGKLVVVKRKARMGRNPQTGEAIKIPAKTVLKFRIAKAMKESALK*