ggKbase home page

PLM3_127_b2_sep16_scaffold_12488_1

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(3..719)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, delta subunit Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SG60_THIDA bin=16ft_combo_ws3_JS1 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 236.0
  • Bit_score: 257
  • Evalue 8.10e-66
DNA polymerase III subunit delta similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 192.0
  • Bit_score: 69
  • Evalue 1.20e-09
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 236.0
  • Bit_score: 258
  • Evalue 6.60e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 717
GTGGGTATCGAGGCGCTGCTCGAGCGCTTCGGCCGGGGCGACTTCCCGGCCGCCCTCTACCTCGAGGGCCCCGACGAGGGGCTGAAGGCCGCCCTGCTGGCCGAGTTGCGGCAGGCCTGGGCCGGCGCGTGCCCCGAGGCGCCGGCGGCCCGCGTGTTCATCGCCTCCGAGACCGGCGTGGACGAGCTGCTCGCCGCCTTCCAGGGCGGCTCCCTGTTCGCCTCGCGCGAGCTCCTCCTCGTGCTCAAGGTCGAAGATTTCGGCCGCAGCGAGAAGCGGGTCTCCGCCTTGATCGAGGGTCTTGGCCGGCCGAACACCGGCACCTGCATGGCGCTGGTCGAATCGCCTGCCGAGACGGAGCGAAAGTCACTGGAGTCCCTGCGGGCGGCCTGCTCGGTCCGCTGCGTGGCGATGCCGCCCACGCGCGCGACCCTCCTCGAATGGGGCAACCGGCGCATGGCACGCGAGCGGATCACGCTCGACCCCAGGACCATGGACGCGGTGGTCGATGCCTGCGAGGGCGATGCCACCACGTTCTTCGACGAGCTCGGAAAGTTGTGCGCCTGGGCCGGGCCCGGCGGACGGCTGACGCGTGAAGACGTTGCGACCATCCTGCGCCCTGTGCTAGGCGCCGACCTCACAGGTTATCTGGGCGCGATCGTCGCCGGGGACGCAGCACTCGCCGCCCGACGGCTCGGGCGCCTGCTCGCGGCCGGC
PROTEIN sequence
Length: 239
VGIEALLERFGRGDFPAALYLEGPDEGLKAALLAELRQAWAGACPEAPAARVFIASETGVDELLAAFQGGSLFASRELLLVLKVEDFGRSEKRVSALIEGLGRPNTGTCMALVESPAETERKSLESLRAACSVRCVAMPPTRATLLEWGNRRMARERITLDPRTMDAVVDACEGDATTFFDELGKLCAWAGPGGRLTREDVATILRPVLGADLTGYLGAIVAGDAALAARRLGRLLAAG