ggKbase home page

PLM3_127_b2_sep16_scaffold_21909_1

Organism: PLM3_127_b2_sep16_Eisenbacteria_70_8

partial RP 40 / 55 MC: 3 BSCG 38 / 51 MC: 2 ASCG 9 / 38
Location: comp(132..884)

Top 3 Functional Annotations

Value Algorithm Source
id=5225225 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 251.0
  • Bit_score: 110
  • Evalue 2.20e-21
tolA; membrane protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 104.0
  • Bit_score: 58
  • Evalue 2.80e-06
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 251.0
  • Bit_score: 110
  • Evalue 3.10e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 753
GTGGAATCGCAGACTCCTCCCGGCTCGAAGCCACCGGTACCGCAGCATCCTGCCCCCCCTGAGAAACCATGGATCTCCCCGCGTCTCCGCGACAAGCTGGGTGATCCCGAGCCCGGAGCGCCGAAGGAAGGACCCGCCCCCTGGGTCGGCATCGTCCTCGTGCTGCTCGTGATTGGCGGCGGGGCCGGGCTTTTCGTCACCATGCGCTCCGGCGCCGCCAGGCAGAAGGCGGAGGCCGAGCGGAGCGCGCAAGCGAGGGCGGTCGAGGCGGCGGCCGAGAGCACCGCCAACGCCGCGAAGATCGACTCGATGCGCGCGGTAGCCGCCGCGCGCGCGGCGGCCGATTCGGCGGCCGGCATCGGCAAGGCGGGCTCGACGGCAGGGCAGGCGAGCGCGTCAGCCAAGCCTCCTGCGTCCGGCGGGGCGTCGGCGGCATCGTCACGCCCCGCGGCGGCGACGCCACCTGCGGGCGGCGATGCCGCGCCAGCCAAGCCCAAGGTGGTCGAGAAGGGCCCGTTCGGCCTCGATGTCGGCACGTTCCTCGCCGAGGAACGGGCCACCAGCGAGCTCGCCCGGCTCAGCGCCGCCACCGGCCTAAAGGGCAAGGTCATCACGCGGAACGAGGACGGCGGCGACGCCTATCACGTCGTCCTCGGCTCGTTCGCCACCCGTGCGATCGCGGACAAGCGGGCGGAATCACTGGTCGGCCGCTCGCTGGTGAACCAAGCCCAGTCCGTCTCGCTGGCTCCCTGA
PROTEIN sequence
Length: 251
VESQTPPGSKPPVPQHPAPPEKPWISPRLRDKLGDPEPGAPKEGPAPWVGIVLVLLVIGGGAGLFVTMRSGAARQKAEAERSAQARAVEAAAESTANAAKIDSMRAVAAARAAADSAAGIGKAGSTAGQASASAKPPASGGASAASSRPAAATPPAGGDAAPAKPKVVEKGPFGLDVGTFLAEERATSELARLSAATGLKGKVITRNEDGGDAYHVVLGSFATRAIADKRAESLVGRSLVNQAQSVSLAP*