ggKbase home page

PLM3_127_b2_sep16_scaffold_1984_14

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(16628..17182)

Top 3 Functional Annotations

Value Algorithm Source
Putative Type IV pilin PilA Tax=Candidatus Nitrospira defluvii RepID=D8P8D3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 155.0
  • Bit_score: 94
  • Evalue 9.10e-17
putative type IV pilin PilA similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 155.0
  • Bit_score: 94
  • Evalue 2.60e-17
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 171.0
  • Bit_score: 123
  • Evalue 2.60e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 555
ATGTATGTCTATCCCATCATAAAGAAGATTAAGAGTCACAAGACAGGCCTGGCAAGCTCTGAGCAAGGCTTCACGCTCATCGAGATGCTGATTGTCGTGGCTATTATAGGCATTGCCGCGCTCATTGCACTCCCAAACTATTTGGTGTGGCAGTCTCGCTCTGAGTTAAGACAGGCGGTCACTGAGGTGCAGAACCAGCTACTCCTAGCTCGCATGGCAGCCTTAAGCCGAAATGCTCCTGTGACGGTGGCCATCAGCGTCACCAACGGCGCTGTACTGACGACAACGACGAATGCGGCGACAGGGGCACTGGTGCTGGCCTCCGTCAGCGTCAGGCTGCCTCATGTCGTGGACCTGAAAGTGGGTCCGTCCGCCTCGTGGACATCAACCGTGACGGCAAACGTATCGTTTAACTCGATGGGCATGCGATCCGGCGGCCCCGGGCCGACGTTGAACCAGGAACTCGCAATGGTCAATGACAAGGGCGTCCAATTTGCGATGAAGGTGACTCCGCGAGGCGTCGTCAATTGGTGTCAGGACAGTGTCTGTTCGTAG
PROTEIN sequence
Length: 185
MYVYPIIKKIKSHKTGLASSEQGFTLIEMLIVVAIIGIAALIALPNYLVWQSRSELRQAVTEVQNQLLLARMAALSRNAPVTVAISVTNGAVLTTTTNAATGALVLASVSVRLPHVVDLKVGPSASWTSTVTANVSFNSMGMRSGGPGPTLNQELAMVNDKGVQFAMKVTPRGVVNWCQDSVCS*