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PLM3_127_b2_sep16_scaffold_9102_3

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2740..6696)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK41053.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 1319.0
  • Bit_score: 2378
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 1319.0
  • Bit_score: 2378
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta Tax=Candidatus Nitrospira defluvii RepID=D8PCU4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 1319.0
  • Bit_score: 2378
  • Evalue 0.0

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 3957
ATGTCCGAAACGACTCTGCAAGAGTTCATCGAGCGGAAAGACTACTCTCGCATTCATAGTAGCATCGACATTCCTGATCTTATTGAGATCCAGAAGCGCTCCTATGAAGAATTCCTTCAGCGGGAGGTCGAGCCGGAACGTCGAAAAGATCATGGGCTCCAGGCAGCCCTGGCGAGTGTCTTTCCGATTCCGGACTACAACAATACGGCCGTATTGGAGTTTACGAGCTACACGCTCGGCACTCCCAAATACGATGAGCGGGAATGCCTTGAGCAGGGGATGACCTTTGCCGTTCCGCTGAAACTCCGGGTGCGCCTGGTCGTGTTCGACAAGGAAGACAAGGGCCCCAAGAAGAAAGTGCTCGACGTTCGAGAGCAGGAAGTCTACGTCGGCGAACTGCCGCTCATGACGGAACGCGGGACCTTCATTGTCAACGGCACGGAGCGTGTGGTGGTGAGCCAGTTGCATCGGTCTCCCGGTGCGTCCTTCACGCACGATAAAGGGCGGACGCACTCCAGCGGCAAGGTGTTGTATTCCGCCAGGATCATTCCCTATCGCGGATCGTGGCTGGATTTCGAGTTTGATGCACGCGACATTCTCTATGTGCGCATCGACCGTCGGCGGAAAATGCCGACGACTATTCTTTTGAAGGCATTCGGGTTTTCGAGCGACGATTTGCTCAAGATGTATTACCCGGTCGAGGAAGTTCGGGTCGTCAAGGGCAAGATGCTGCGAAAGCTCGACCCAGAGATCCATCAGGGTCTGCGCTGCTCGGCTGAAGTGCTTGAAAAGGGCGGCAAGGAGCCGCTGGTACGGGAAGGCGCCAAGCTCACGAAGGGGCTTATCGCGAAGCTCAAGGCGGCCGGGGTGAAGGAAATCCCGCTTGCGCCGAGCGAGTTGGTCGGCCGCGCGGTACTGACCGAACTGGTGGATTCAAAGAAGAACAAGATCGCCGAAAGAAATCAGCGGCTTACTGCTGAGATTGTCGAGGCGCTGCTCGAGAGCGACATCGAAGAATTCAAGGCGATCTATTTTGATACGGTCACGTCTACGCCGGTGATCCTGGATACGCTGGAGATGGATAAGACCGCCTCGAAAGAGGAGGCGATGGTCGAGATCTATCGTCGCTTACGGCCGGGAGAAACGCCCTCAGTCGACACGGCACGAGCCCTGTTCGACAATCTGTTCTTGAACTCCAAGCGATACGATCTCTCGCCGGTCGGGCGCCTGAAGTTGAACAAGAAGCTCGGCCTCGATCTGCCGTTGGAGCAGCGGACTCTAACGGCGCAGGACATGGTCGAGGTGATCCGCTATCTCGTGAACCTGAAGCTGGGCAAGGGCGAAATCGACGACATCGACCACTTGGGCAATCGTCGTGTCCGTTCGGTCGGCGAGTTGTTGGAGAATCAATTCCGACTCGGGCTGGTCCGAATGGAGCGCAGTATCAAGGAGCGGATGAACCTGCTGGATATGGAAACGGTGTTGCCGCACGATTTGATCAATGCGAAACCCGTCGTCGCCGCAGTGAAAGAGTTCTTCAGCAGCAGCCAGTTGTCTCAGTTCATGGACCAAACGAATCCGCTCGCAGAAATTACGCACAAGCGGCGGCTTTCCGCGCTCGGTCCCGGAGGGTTGACCAGGGAACGGGCGGGGTTCGAAGTTCGCGACGTCCATCCTTCGCACTATAGCCGTATTTGTCCGATCGAAACGCCGGAAGGCCCGAACATCGGCTTGATCACGTCACTGGCGACTTATGCGCGCATCAATAAGTTCGGGTTTATCGAAGCGCCCTATCGCAAAGTGGTGAAGGGGCGAGTCACCGACGAGATCGAGTTTCTTTCCGCGATCGAAGGGGACAAGTACATCATCGCGCAGGCGAACGCGAAAGTGGATGCTTCTGGTCGGCTGGTATCTGAAACCATCTCGGCGCGAGCTGCCGGAGATTTCGTGACAGCCACCTCAGACAAGATCGAATATATGGACGTGTCGCCGAAGCAGGTGGTGAGCGTGGCCACGGCCTTGGTGCCGTTCTTGGAGCACGACGACGCCAACCGTGCCTTGATGGGATCGAACATGCAGCGTCAGGCGGTACCGCTGCTCAAGTCGGAGGCTCCGTTAGTCGGCACGGGAATGGAAACCGTGGTCGCGCGTGACTCGGGCTATGTCGTGCAGGCCCGGCGTGCCGGCGTCGTGGAAAGCGTGGATGCCACGAGGATCGTCGTGCGTGCCGGTTCGAAAGAAGGTCGGAAAAGGAATGATGCCGGCCTGGATGTGTATGATCTGATCAAGTTCCAGCGATCGAATCAGAGTACGACCATCACACAGACGCCAGTGGTGCGGCTTGGGCAGCCAGTGAAAGTGGGACAGGTCTTGGCTGATGGTCCCGCCATTGATCACGGCGAACTGGCATTAGGTAAGAACATTCTCGTCGCCTTCATGCCCTGGGGGGGATACAACTTTGAAGACGCCATTCTATTGAGTGAAAAACTGGTACGGGAGGATGCGTTCACCTCGATTCACATTGAGGAATTCGAGGTGGAAGCCCGCGATACCAAGTTGGGGAAAGAGGACATTACTCGCGACATCCCGAACGTCGGAGAAGAAGCGCTTCGCGATCTCGACGAGAGCGGGATTATCCGTATCGGGGCCGAGGTGAAGCCTGGAAATATTCTGGTCGGGAAGGTGACGCCGAAAGGCGAAACACAGCTCACGCCGGAAGAAAAACTGCTGCGGGCCATCTTCGGTGAGAAAGCGGGCGATGTGAAGGATACATCGTTAACGGTGCCGCCGGGCGTCGAGGGCATCGTCGTTGATGTGAAGATCTTCTCGCGCAAGGGGCTCGATAAGGACGAACGATCCAAGAGTATCGAAAGCGATGATGCGATGAAGCTCCAGCGTGATCACCACGAGGAGCTTCGTATTATTGACGAAGAGAAAACGAAGAAAATCAGAAAACTGCTGCTGGGGAAGGTGGTCGGCCGTGACTTGATGGATCCTGAGAGCGGCGATGTCATTCTGAAGAAGAAGGGCAAGCTGACCGCAGAGATTCTCAAGCGGCTGCCGGATGAAACCGTCCGGTACATCATTCTGAGCGATCCTGACGAGCAGAAAGAACTGGAAGACGTCGAGCGGCGGGCGAAGGAGCAAATCGAAATCCTTCAGACGCTGTACGACGAGAAGGTTGGGCGTCTGAAGCGGGGCGATGAGCTTCCGCCTGGCGTGATCAAGCTCGTCAAGGTCTATGTCTCGATGAAGCGCAAGATTCAGGTCGGCGACAAGATGGCCGGGCGGCATGGAAACAAAGGCGTGGTCTCTCGGATCTTGCCTGAGGAGGACATGCCCTGCCTGCCGGATGGGACGCCCGTGGAAATTGTGCTCAATCCGCTCGGCGTGCCGTCACGTATGAACGTCGGTCAGATTCTGGAAACTCACCTGGGTTGGGCGGCCAGGACACTGGGGATCAAGGTGGCGAGCCCGGTGTTCGACGGGGCGTCAGAAACAGAAATTAAGGAACTGCTCAAGAAGGCGAACTTGCCGACCAGCGGGCAAACCATGCTGATGGACGGCCGAACCGGGGAAATGTTCGGCAGCCCCGTCACGGTCGGCTACATGTATGTCTTAAAGCTCCACCACTTGGTCGACGACAAGATTCACGCACGGTCGATCGGTCCCTATTCGCTCGTCACGCAGCAGCCGCTCGGTGGCAAGGCCCAATTCGGCGGCCAGCGGTTGGGAGAAATGGAAGTGTGGGCCTTGCAGGCCTATGGCGCTGCTTCCACGCTGCAAGAGTTTTTGACGGTGAAATCGGACGACGTGCCGGGCCGATCGCGGATGTACGAAGCGATCGTCAAGGGTGAGCCGTTCCTGGAACCTGGATTGCCCGAGTCGTTTAACGTCTTGGTCAAAGAGCTCCAGAGTTTGGGGCTCGACGTCGAACTGATCAAGTCGCAAGACTAA
PROTEIN sequence
Length: 1319
MSETTLQEFIERKDYSRIHSSIDIPDLIEIQKRSYEEFLQREVEPERRKDHGLQAALASVFPIPDYNNTAVLEFTSYTLGTPKYDERECLEQGMTFAVPLKLRVRLVVFDKEDKGPKKKVLDVREQEVYVGELPLMTERGTFIVNGTERVVVSQLHRSPGASFTHDKGRTHSSGKVLYSARIIPYRGSWLDFEFDARDILYVRIDRRRKMPTTILLKAFGFSSDDLLKMYYPVEEVRVVKGKMLRKLDPEIHQGLRCSAEVLEKGGKEPLVREGAKLTKGLIAKLKAAGVKEIPLAPSELVGRAVLTELVDSKKNKIAERNQRLTAEIVEALLESDIEEFKAIYFDTVTSTPVILDTLEMDKTASKEEAMVEIYRRLRPGETPSVDTARALFDNLFLNSKRYDLSPVGRLKLNKKLGLDLPLEQRTLTAQDMVEVIRYLVNLKLGKGEIDDIDHLGNRRVRSVGELLENQFRLGLVRMERSIKERMNLLDMETVLPHDLINAKPVVAAVKEFFSSSQLSQFMDQTNPLAEITHKRRLSALGPGGLTRERAGFEVRDVHPSHYSRICPIETPEGPNIGLITSLATYARINKFGFIEAPYRKVVKGRVTDEIEFLSAIEGDKYIIAQANAKVDASGRLVSETISARAAGDFVTATSDKIEYMDVSPKQVVSVATALVPFLEHDDANRALMGSNMQRQAVPLLKSEAPLVGTGMETVVARDSGYVVQARRAGVVESVDATRIVVRAGSKEGRKRNDAGLDVYDLIKFQRSNQSTTITQTPVVRLGQPVKVGQVLADGPAIDHGELALGKNILVAFMPWGGYNFEDAILLSEKLVREDAFTSIHIEEFEVEARDTKLGKEDITRDIPNVGEEALRDLDESGIIRIGAEVKPGNILVGKVTPKGETQLTPEEKLLRAIFGEKAGDVKDTSLTVPPGVEGIVVDVKIFSRKGLDKDERSKSIESDDAMKLQRDHHEELRIIDEEKTKKIRKLLLGKVVGRDLMDPESGDVILKKKGKLTAEILKRLPDETVRYIILSDPDEQKELEDVERRAKEQIEILQTLYDEKVGRLKRGDELPPGVIKLVKVYVSMKRKIQVGDKMAGRHGNKGVVSRILPEEDMPCLPDGTPVEIVLNPLGVPSRMNVGQILETHLGWAARTLGIKVASPVFDGASETEIKELLKKANLPTSGQTMLMDGRTGEMFGSPVTVGYMYVLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWALQAYGAASTLQEFLTVKSDDVPGRSRMYEAIVKGEPFLEPGLPESFNVLVKELQSLGLDVELIKSQD*