ggKbase home page

PLM3_127_b2_sep16_scaffold_17088_3

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1128..1463)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 Tax=Candidatus Nitrospira defluvii RepID=D8PCW3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 161
  • Evalue 3.70e-37
rplX; 50S ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 104.0
  • Bit_score: 161
  • Evalue 1.00e-37
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 111.0
  • Bit_score: 170
  • Evalue 8.50e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 336
ATGAATAAGCAGGCATTGAAGAAGAGTCGAATTTGTAAGGGGGATGTGGTGGTCGTGATCGCCGGGCGCGATCGAGGCAAATCCGGGAAAGTGCTTTCGGTTGATCCCGCAGTGGGAAAGGTTGTGGTCGAAAAGTTGAACATGATCAAGCGCCACACGAAGCCGAATCAGAAAGTCAAGCAAGGTGGCATTCTCGAACGGGAAGCGCCTTTTGCGATTTCAAATGTGATGTATCTGTGCCCTGTGACGCAGAAGCCGACCCGGCTGGGGGTGCGTACGCTCGATGATGGCCGACGGGTCCGGGTCAGCAAAAAATCGAACGACTCAGTCGAGTAG
PROTEIN sequence
Length: 112
MNKQALKKSRICKGDVVVVIAGRDRGKSGKVLSVDPAVGKVVVEKLNMIKRHTKPNQKVKQGGILEREAPFAISNVMYLCPVTQKPTRLGVRTLDDGRRVRVSKKSNDSVE*