ggKbase home page

PLM3_127_b2_sep16_scaffold_25350_3

Organism: PLM3_127_b2_sep16_Nitrospirae_58_30

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 1906..3384

Top 3 Functional Annotations

Value Algorithm Source
lysS; lysyl-tRNA synthetase (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 493.0
  • Bit_score: 833
  • Evalue 1.60e-239
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 493.0
  • Bit_score: 833
  • Evalue 7.90e-239
Lysine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PEW4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 493.0
  • Bit_score: 833
  • Evalue 5.60e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1479
ATGGACGAACTGAACGAACAGCAGCAGCGCATCAAGAAGCTCGACTCCCTGCGTGAAGCGGGCGTAGCACCCTACGGCACGCGATTCGAAGTGAAGGATCGGGCAGGCCAACTGATCAAGCTCCATGCCGAGAAAACCAAAGAGGTACTGGAAGAAGAGAAGATCTCCTGCACCTTTGCCGGACGAATCGTCGCCCTGCGGCGCTTCGGCAAGGCGGGCTTCGCGGTGTTGCAAGACGGATCCGACCGGCTTCAGGTCTATCTCAAGAAAGATTATCTCTCAGAGCAGGGCTATCGCGTCGCCGAGCTGCTCGACTTGGGCGATTGGATCGGCGTGACCGGCACCCTCTTTCGCACGAAGACAAATGAATTCACCGTCCAGGTTACACAGCTGACCTTTTTGAGCAAAGCCCTCCGACCGCTTCCAGAAAAGTGGCACGGGTTGACGGACGTGGAAACACGCTATCGACAGCGCTATGTCGACTTGATCGCCAATCCTGAGGTCCATGGCATCTTTGCCACGCGCAGCCGAATCATCGCCGGCATTCGTGCCTTCTTGATCGAACGAGGCTTCCTTGAAGTCGAGACGCCGATGATGCATCCGATTCCCGGAGGCGCTGCGGCGAAACCCTTTGTCACGCACCATAATGCGCTCGGCGTCGATCTCTATCTCCGCATCGCGCCGGAACTCTATCTGAAGCGGTTGATCGTGGGCGGCTTCCCTCGCGTGTTCGAAATCAATCGGAACTTCCGGAACGAAGGCATTTCCACGATTCACAACCCGGAATTCACGATGCTGGAGTTCTACGTTGCCTATGCCGATTACCAGGACTTGATCATCCTCACGGAAGAACTCGTCTCTTCGTTGGCGCAGCAGGTCCTGGGCAAGACGGTCATCGACTATCAGGGCAAGGAGATCACACTCACGCCTCCGTGGCTCCGCTGGTCGTATCATCAGGCAATTCTGAGGGTGAACAACCTCGATCCTTCCGTCCTTGAGGATAAGAACAAAGTGATTGCGGCGGCCAAAAATCTGGGCATCGCGGTCGATCCGAAATGGCCGCTCTTCAATATTGTGAACGAAATCTTCGAGGAAACGGTCGAGCCCAATCTGCAGCAACCGACGTTCATTACCGACTACCCGATTGAAATTTCCCCGCTGGCACGGCGCAAAGATTCGAATCCGGCATTGACCGATCGCTTCGAGCTCTACATTGCCGGTCGAGAAATCGCGAACGCCTTTTCAGAGTTGAACGATCCACTGGACCAACGGAAACGGTTCGAAGGGCAAGCGGCGCAGCGGGCGGCGGGCGACGAAGAGGCGCATCTGGTCGATGAAGACTTCCTGCGAGCCTTGGAGTACGGCATGCCACCGACCGCGGGCGAAGGCATCGGCATCGACCGGCTGATCATGCTCTTTACCAACCAAGGTTCGATCCGCGACGTGGTTTTCTTCCCACAACTGAGGCCTGAGAAATAG
PROTEIN sequence
Length: 493
MDELNEQQQRIKKLDSLREAGVAPYGTRFEVKDRAGQLIKLHAEKTKEVLEEEKISCTFAGRIVALRRFGKAGFAVLQDGSDRLQVYLKKDYLSEQGYRVAELLDLGDWIGVTGTLFRTKTNEFTVQVTQLTFLSKALRPLPEKWHGLTDVETRYRQRYVDLIANPEVHGIFATRSRIIAGIRAFLIERGFLEVETPMMHPIPGGAAAKPFVTHHNALGVDLYLRIAPELYLKRLIVGGFPRVFEINRNFRNEGISTIHNPEFTMLEFYVAYADYQDLIILTEELVSSLAQQVLGKTVIDYQGKEITLTPPWLRWSYHQAILRVNNLDPSVLEDKNKVIAAAKNLGIAVDPKWPLFNIVNEIFEETVEPNLQQPTFITDYPIEISPLARRKDSNPALTDRFELYIAGREIANAFSELNDPLDQRKRFEGQAAQRAAGDEEAHLVDEDFLRALEYGMPPTAGEGIGIDRLIMLFTNQGSIRDVVFFPQLRPEK*