ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM3_127_b2_sep16_scaffold_62903_2

Organism: PLM3_127_b2_sep16_Rokubacteria_68_9

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(624..1643)

Top 3 Functional Annotations

Value Algorithm Source
Vitamin B12 import system, permease protein BtuC bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 340.0
  • Bit_score: 451
  • Evalue 4.10e-124
btuC; vitamin B12 import system permease protein BtuC similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 338.0
  • Bit_score: 262
  • Evalue 1.00e-67
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 340.0
  • Bit_score: 451
  • Evalue 5.80e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACGGGCGCGGCCAGGCTGGCATGGATCTGCGGCGGCCTATTAGTCATCTTGTCCGTCGTGGCTCTCGGCTCGCTCCTCGTCGGCGCCGCGCCGGTCGCGCCTGGAACGGTCTTCGACCTCATCACCGGCCGCGGCCCGGGCCAGGGCACCGAGCGCACCGTGGTCCTCGCTATCAGGCTTCCGCGCATTGCCGCCGCGGTGCTCGCCGGCGCCGCGCTGGCCGTCGCGGGCGCGGGCTTCCAGGGCCTCACGCGCAATCCGCTGGCGGACCCCTCGATCCTGGGCATCTCGGGCGGCGCTGCGTTCGGCGTGGTGTTGGGCCAGGTGTCGGGGCTCGGGCAGGGGATCGTGGAGGCGCTGGGGCTCACCGCCCTCGGCTTCGCGGGCGCTCTCGTCGCGGGCGTGGCCGTGTACCTGATCGCGTCCACGGCGGGCGGGCTGCCGGTGCACACGCTCCTCCTGGCGGGCGTGATCGTCGGCATCTTCTTTTCGGCCGCGATCACCGTGTTGATCTCGATCGTGGACACCAACCGCCTCGGCGGCGTCATCCACTGGCTCCTCGGGAGCGTGGCGCCCATTCCCCCGGGCTCGCTCGGCGTGTTCGCCCTCGCGACCGCGGCCGGCCTCTGGCTCGTCCTTGGCCAGGCCCGCGCGCTCAACCTCCTGGCGCTGGGCGACGAGGGCGCCCTCGAGCTGGGCGTGGACGCGCTGCGCGTGAAGCGGCGCGTCTTCGCCGGCGCGGCGCTCCTCACGGGCACCGTCGTAGCCTTCGTCGGGCCCATCGGCTTCGTCGGCCTCGTCGTGCCGCAGGCGCTCCGGATGCTGCTCGGCCCCGACAACCGCGTCCTTGTCCCCGCGGCCCTGCTCGCGGGCGGCGCTTTCCTCCTCGCGGCCGACACGCTGGCGCGCACGGTGATGGCGCCCGCCGAGCTGTCAGTGGGCGTGCTGACGTCCTTCTGCGGCGCGCCCGTGTTCATCTGGCTCCTGCGCTCGCGCGCGGGGCGGACGGCGCCGTGA
PROTEIN sequence
Length: 340
MTGAARLAWICGGLLVILSVVALGSLLVGAAPVAPGTVFDLITGRGPGQGTERTVVLAIRLPRIAAAVLAGAALAVAGAGFQGLTRNPLADPSILGISGGAAFGVVLGQVSGLGQGIVEALGLTALGFAGALVAGVAVYLIASTAGGLPVHTLLLAGVIVGIFFSAAITVLISIVDTNRLGGVIHWLLGSVAPIPPGSLGVFALATAAGLWLVLGQARALNLLALGDEGALELGVDALRVKRRVFAGAALLTGTVVAFVGPIGFVGLVVPQALRMLLGPDNRVLVPAALLAGGAFLLAADTLARTVMAPAELSVGVLTSFCGAPVFIWLLRSRAGRTAP*