ggKbase home page

PLM3-1_200_b2_sep16_scaffold_8266_1

Organism: PLM6_200_b2_sep16_Chloroflexi_RIF-CHLX_70_7

near complete RP 40 / 55 MC: 4 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 2..169

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 55.0
  • Bit_score: 107
  • Evalue 3.10e-21
rplB; 50S ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 54.0
  • Bit_score: 92
  • Evalue 2.20e-17
Tax=RBG_16_RIF_CHLX_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 55.0
  • Bit_score: 121
  • Evalue 2.20e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_69_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 168
CGGGGCGTGGCCATGAACCCGCGCGACCACCCGCACGGCGGCGGCGAGGGCAAGTCGCCGACGGGGATGCCGCCCAAGACGCCGTGGGGCAAGCCGGCGATGGGCTACCGCACCCGACGTTCGAAAACGACCGGCCGACTCATCGTCCGCTCGCGGCACCGCAAGTAA
PROTEIN sequence
Length: 56
RGVAMNPRDHPHGGGEGKSPTGMPPKTPWGKPAMGYRTRRSKTTGRLIVRSRHRK*