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PLM3-1_200_b2_sep16_scaffold_8266_4

Organism: PLM6_200_b2_sep16_Chloroflexi_RIF-CHLX_70_7

near complete RP 40 / 55 MC: 4 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 827..1090

Top 3 Functional Annotations

Value Algorithm Source
Suspect SCG annotation. See neighboring gene [PLM3-1_200_b2_sep16_scaffold_8266_5]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
rpsC; 30S ribosomal protein S3 bin=bin8_Chloro species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 80.0
  • Bit_score: 143
  • Evalue 8.10e-32
30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 80.0
  • Bit_score: 111
  • Evalue 7.40e-23

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 264
ATGGGACACAAGGTCCACCCGTACGGCTTTCGGCTCGGGGTGACCCGCACCTGGACCGCGAAGTGGTACGCCGACAAGGAGTACACGACGCTGCTCAAGGAAGACATCTCCGTGCGCGAGCTCGTCGGGCGCCGGCTGGCCAACGCCAGTGTCAGCGGCGTGGAGATCGAGCGCGGCATCAACCACGTCACGGTGACCGTGCACACCGCCAAGCCGGGCATCGTCATCGGCAAGGGATCCTGCGCCAGCAGATCGGCGAGCTGA
PROTEIN sequence
Length: 88
MGHKVHPYGFRLGVTRTWTAKWYADKEYTTLLKEDISVRELVGRRLANASVSGVEIERGINHVTVTVHTAKPGIVIGKGSCASRSAS*