ggKbase home page

gwa2_scaffold_7084_7

Organism: GWA2_OD1-rel_39_18

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 7 / 38
Location: comp(5887..7215)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKR09703.1}; TaxID=1618813 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 442.0
  • Bit_score: 851
  • Evalue 4.30e-244
RNA polymerase, sigma 70 subunit, rpod subfamily KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 431.0
  • Bit_score: 394
  • Evalue 4.90e-107
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 392
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWA2_39_18 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGACAAAAAATAAAATGGGGCACAAAAAAACTTTGAAAAAATCAAAGAAAGAGATGAGACGGAATAAATTTCAAAAACAAACCAAAACCAAAATAGCAAGACGGTCTGCTTTGTCCAAAAAGCAAAAAACTAAAAACAAAAAAATGGCGTCTTCTAAAAAATCGCAAAAAAAAGAAACGCGCCCAAGAATTGAAGTCCGGACCGCCAAAATCAAAAGGAGTAAGATAAAAAACAAAAAAAACGCAACCCTGGTAGAAGTAATTGTGGAAAAAAGCAAAGAACGCGGATTTATCACTTATTCAGAAATATTGCATCATTTTCCAAAAATAGAAAATGATTTGGGTGCTCTGGAAGAGCTCTATCATAAACTTGAAGAAATGAATATCGAGGTGAGGGAATCTAAAGATATTCTGGAAGAGATGCTGGGGGGCGAAGGAGCTGAAGGAGAAAAATTAGAAAGAGAAAGAAAGCGCGTGGAAGCAATGGACCTAAACTCCAATGAACAGGATTCAGTGCAAATGTATCTTTCTGAAATAGGCAAGGTGGCGCTTTTGACCGGGGCCGAAGAAAAAGATTTAGCTAAAAAAATACAACAAGGCAGTGAGGATGCCCGACAAAGATTAACGCGCGCCAATTTAAGATTAGTTGTCTCCATCGCCAAAAGATACATTGGCCGAAGCCCGCATCTTTCGCTTTTAGATTTGATACAAGAAGGCAATCTGGGTCTTTTTCGCGCCGTAGAAAAATTCGACTACACTAAAGGTTTTAAATTTTCTACCTATGCCACGTGGTGGATCAGGCAGGCAATCACCAGAGCGTTGGCTGACCAAGCGCGCACCATACGCATACCCGTACACATGGTGGAAACCATAAGCAAATTTGTCCAAACCAAACGCAGACTTTTACAGAGCTTGGGCAGAGAGCCATTGCCGGAAGAAATCGCCTCGGAGATGGGGCTGGACGTTGAAAAGGTTCATCACATTATGAAAATATCTCAGGAAACCGTTTCATTGGAGGCCCCGGTAGGAGACGATGAAGAGGATTCGATTTTAGGAGAATTTCTGGAAGATGAAAAAGAGATATTGCCCGATCAATCAACCGCCCGAAGGCTTTTGCGCGACCAATTGAAACAAATTTTAATGGACCTTCAGCCACGAGAACAAAAAATTCTTCAAATGAGATTTGGACTCAACAAAGAAATTCCACGTACGCTTGAAGAAGTGGGCAAGGAATTTGGCGTGACCAGAGAGCGCATCAGACAGATAGAGGCTAAGGCGCTGGAAAAAATCCGCAAACATCAGCAGATAAAAAAAATAGAAGATTATTAA
PROTEIN sequence
Length: 443
MTKNKMGHKKTLKKSKKEMRRNKFQKQTKTKIARRSALSKKQKTKNKKMASSKKSQKKETRPRIEVRTAKIKRSKIKNKKNATLVEVIVEKSKERGFITYSEILHHFPKIENDLGALEELYHKLEEMNIEVRESKDILEEMLGGEGAEGEKLERERKRVEAMDLNSNEQDSVQMYLSEIGKVALLTGAEEKDLAKKIQQGSEDARQRLTRANLRLVVSIAKRYIGRSPHLSLLDLIQEGNLGLFRAVEKFDYTKGFKFSTYATWWIRQAITRALADQARTIRIPVHMVETISKFVQTKRRLLQSLGREPLPEEIASEMGLDVEKVHHIMKISQETVSLEAPVGDDEEDSILGEFLEDEKEILPDQSTARRLLRDQLKQILMDLQPREQKILQMRFGLNKEIPRTLEEVGKEFGVTRERIRQIEAKALEKIRKHQQIKKIEDY*