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PLM1_100_b1_sep16_scaffold_5229_7

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 6176..6973

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Nitrospina gracilis 3/211 RepID=M1Z3D0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 234.0
  • Bit_score: 188
  • Evalue 8.70e-45
RNA polymerase sigma 28 subunit FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 231.0
  • Bit_score: 186
  • Evalue 7.20e-45
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 235.0
  • Bit_score: 230
  • Evalue 1.60e-57

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Taxonomy

R_RIF_OD1_12_48_12 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGAAAACATCGCAAATAGATTTGCCGAATGGGCGTTTCACTCCCAGCCACAAAGCTGACCAGGCAAAAGAGGAGAGGATCACCAAGTATCTCCCGCTGGTGCGCTTTGTCGCTGAAAAGATTCATCGCCGGTTGCCGCCGGGAGTTGATTTAGATTCGCTGATTCATTCAGGTGTGGTTGGATTATTGGAGGCATTGAAGCGCTTCGATCCGCAGCGCGGCGTCGAGTTCGAAGTCTATGCGCGTTATCGCATTCAGGGAGAAGTTATGCAGTGTCTGCGCTCCTTGGATTGGGTGAGCCGGTCGGTTCGCTCCTGGGGCCGCAAGATTGAAGCGGCGCGGGCGAAGCTCGCCGGCAAGTTTATTCGGGAGCCGAGCGCGGAAGAAATGGCGAAAGAGTTGGACATTCCCCTGGAGAACTATTATCGCCTCGACCAGCAGGTTAGCCAAGCCACCTTGCTCAGCATGGATGATCTGACGGTCAGCTCGGAATCGGGCTGGGAAGGCGCGCACCAAAAATTCACGCAAAACCCCTGTCTCGATCCGTTGAGCTTCGTGGAAAGCAAGGACCTGGTGGATAAGTTGGCGTCGGCCGTCGAGGTGTTGCCGGAACGGGAGCGGATGGTCGTGACGCTGTACTATCACGAAGAGCTGACCCTGCGCGAGATCGGCGAGATCCTCAATCTGAGCGAGGGGCGCATTTGTCAAATCTTCGCTCTAGCGGTGAGGCGTTTGCGGGGCGTGCTGGGCGTCTCAGTAAAGCCAAAAAGACGGTTCCTCGGCCAAGCGATCGGCTGA
PROTEIN sequence
Length: 266
MKTSQIDLPNGRFTPSHKADQAKEERITKYLPLVRFVAEKIHRRLPPGVDLDSLIHSGVVGLLEALKRFDPQRGVEFEVYARYRIQGEVMQCLRSLDWVSRSVRSWGRKIEAARAKLAGKFIREPSAEEMAKELDIPLENYYRLDQQVSQATLLSMDDLTVSSESGWEGAHQKFTQNPCLDPLSFVESKDLVDKLASAVEVLPERERMVVTLYYHEELTLREIGEILNLSEGRICQIFALAVRRLRGVLGVSVKPKRRFLGQAIG*