ggKbase home page

PLM1_100_b1_sep16_scaffold_5490_6

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3693..4661)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 27.0
  • Coverage: 333.0
  • Bit_score: 131
  • Evalue 1.50e-27
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 22.4
  • Coverage: 268.0
  • Bit_score: 76
  • Evalue 1.30e-11
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 332.0
  • Bit_score: 152
  • Evalue 6.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGACACGATCGATCAAGACCTGCGCGATATTTGTCTTATTGGCCCTATCGACTCTATCAGCGAATGCGGGCGCCGCCGACAAGATCACGATGAGCTCGACCAATCCGACAGCGCTGGAAATTGACCAAATGGTCGCTCGCGAGAAAGGATTCTTCGCGCGGGAGAATATTGAACTTGACGTCACCTACATGCAGCCCGATCTCGTCATCAAAGCACTGATTGCCGGAACGGTCGATCTGGCGAGATCGGGAACCCATTTCGGCGTGATCTCGGCAGCCCGCGGCGCCGAAGTGAAGATCATCGGCGGGTCGACCTACGGCTATCCCTATCAAGTGATTAGCCAACCTCAGTTCAAATCCCTCGCCGACCTTAAAGGACAAAAGATCGCCGCTGCCAGCCTGGCCAGCATTACCACGACGATTTTTAAAGATGTCATGCAGCGCCAAGGTATCCCGCCGACGGCTTATACTCTGCTTTTTGTTGGAGGCAGTCCGGAAAGATTTCAAGCCGTGGGTTCGGGCCAGGTGGCCGCTTCGCTGGCCGAAGCGCCGCCTTTCAATTTTAGGTCCATCGATGCCGGCAGAAAGATTTTGCTGAACTATTCCGACGAGATCAAAAACTTGCAATACACCTCCTTCTTCGCCTCGATTAAATCGCTGTCGCAAAACAGGCCCCTGTTCATGCGATTTATAAGAGCGTTGGGCCAAGCGATGCGCTGGATAAATGATCCGGCCAACGAGAAGGCGGTCACCGAAGTCGTGGCGCAGCGGTTGAAGCTCGATGAATCGACCGCGGCGCGAACCTATAAATTCATGGTTCCGGAGAACAAGGCGTTTCGTAACGAAGCCGCCGTCGACGGCCCCGGCCTGGCAGAGATGATCCGCTTGCTCGCGTTGGATAATATGATTCCGGAGCGAAAACCGTGGGAAACCTTCGTCGACTCCGCGTTCATACCGGCGGCCAAGTAA
PROTEIN sequence
Length: 323
MTRSIKTCAIFVLLALSTLSANAGAADKITMSSTNPTALEIDQMVAREKGFFARENIELDVTYMQPDLVIKALIAGTVDLARSGTHFGVISAARGAEVKIIGGSTYGYPYQVISQPQFKSLADLKGQKIAAASLASITTTIFKDVMQRQGIPPTAYTLLFVGGSPERFQAVGSGQVAASLAEAPPFNFRSIDAGRKILLNYSDEIKNLQYTSFFASIKSLSQNRPLFMRFIRALGQAMRWINDPANEKAVTEVVAQRLKLDESTAARTYKFMVPENKAFRNEAAVDGPGLAEMIRLLALDNMIPERKPWETFVDSAFIPAAK*