ggKbase home page

PLM1_100_b1_sep16_scaffold_5393_6

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3599..3934)

Top 3 Functional Annotations

Value Algorithm Source
frdD; Fumarate reductase subunit D (EC:1.3.99.1) similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 115.0
  • Bit_score: 89
  • Evalue 3.80e-16
frdD; fumarate reductase subunit D FrdD; K00247 fumarate reductase subunit D bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 115.0
  • Bit_score: 107
  • Evalue 4.80e-21
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 111.0
  • Bit_score: 135
  • Evalue 3.90e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGACGACAGAAAAAACCATGGAACCCCTCTGGTGGGGACTCTTCTCTGCCGGTGGCGTAGTGGCTGCATTCTTAGTTCCCATTCACATCATTCTAGTTGGCTTCGCGGTGCCACTTGGCTGGACTACCGACACCGGCGCGTTGTACCGCATCTGGTGGGTAAAGCTTTATCTCTTCGTTCTGATCGTTCTGCCTCTCTATCACTGGGCCCATCGCTTCTACTTTACCCTCAATGATATGGGGCTCAAAGCAATCAGTAAACTTCTCGCCGTGCTGTGCTACGGCGGGGCGATCGTCGGGACGTTTGCTACTGCGTGGATTCTGTTAAAGATTTGA
PROTEIN sequence
Length: 112
MTTEKTMEPLWWGLFSAGGVVAAFLVPIHIILVGFAVPLGWTTDTGALYRIWWVKLYLFVLIVLPLYHWAHRFYFTLNDMGLKAISKLLAVLCYGGAIVGTFATAWILLKI*