ggKbase home page

PLM1_100_b1_sep16_scaffold_13155_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1645..2964)

Top 3 Functional Annotations

Value Algorithm Source
SufD, needed for fhuF Fe-S center production/stability bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 441.0
  • Bit_score: 450
  • Evalue 1.60e-123
iron ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 436.0
  • Bit_score: 392
  • Evalue 8.40e-107
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 441.0
  • Bit_score: 450
  • Evalue 2.20e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGTTAGCGACGGAGACCAAAGAGCAATATCTCGCTGCGTTCGAGCAGTCGCGCTCGAATCGAAAGGCCGAAGACCCGGGGTGGCTCAACGAGCTGCGCGAAGCCGGGATCGGTAGTTTTGCGGCGCTGGGCTTTCCGACAAAAAAGAGCGAAGAGTGGAAGTACACCAACGTCGAGCCGATTTGGTCGCAGCAGTTTGCTCATGCCAACGGCGAGGGTAAAAGCGTTAACGCCAATGGAATCTTGTCAGAATCGTTGGTCCGTGGCGCGCCAAATCGGCTGGTTTTTATCAACGGTGTCTACGCGCCACAATTGTCGCATAGGGAAAATTTGCCCAACGGCGTGCGCGTTTTGAGCTTGGCCGAGACGTTGATACAAAATGACGGAGTTTTGGCGACACAGCTCGGCAAGTACGCGCGCCACCGGCGCGAGCCGTTTGTGGCGCTTAATACGGCATTCATGGAGGACGGCGCCGTCGTGGTCGTTCCCGACGGTTGCCGATTGTCCGAGCCCATCAATCTTGTTTTTGTCTCGATAGCGGCGCAGCGTCCGGTGGTTTCTCACCCGCGCATTTTTTTGCTTCTGGGTGCCGGCAGCGAAGCAAAGATTGTCGAGAATTATCTCGGTCTGAATGGCGCGGCGTATTTCTGCAATGCGGTCACGGAATTGATCGGTGGCTCGGACGCGGTGGTCGAACACTATCGTTTGCAACAGGAAAGCGACGCCGGGTTACACGTCGGTACGCTGGAGGCGGTGTTACAGAGGGGCTGTCAACTCACCGCGTACGCGATTACATTAAGCGGTGCCTTGGTGCGTAACAACGTGCGGGTCGTGATCGACGGCGAAGGCGCGGGTTGCATGCTCAATGGTCTTTACATCGTCGACGGCAAGCAGCACGTGGATAATTTCACGGAGATCGAGCATGCCAAGCCGCGCGGCAGCAGCATAGAACTCTACAAAGGAATTCTCAGCGGCAGCAGCCATGGCGTCTTCAATGGCAAAATCGTTGTCCACAAGGACGCGCAGAAAACCGACGCCAGGCAAACCAACAAGAATCTGCTGCTTTCGGAAAACGCGGTGGTGAATACCAAGCCACAGCTAGAGATCTACGCCGATGATGTCAAGTGCAGTCACGGCTCGACCATCGGCCAGTTAGACCCCGACGCGTTGTTTTATCTTCGCTCGCGCGGGCTCGGGCGCGAGGAGGCTCGAAATCTTTTGAGCTTTGGATTCGCCAGCGATATCGTCGGGCGGATTAAAATTGATTCACTACGCCAACGGCTCGACGATTTGTTGGTGGCAAAGTTTCGCCGAAACTGA
PROTEIN sequence
Length: 440
MLATETKEQYLAAFEQSRSNRKAEDPGWLNELREAGIGSFAALGFPTKKSEEWKYTNVEPIWSQQFAHANGEGKSVNANGILSESLVRGAPNRLVFINGVYAPQLSHRENLPNGVRVLSLAETLIQNDGVLATQLGKYARHRREPFVALNTAFMEDGAVVVVPDGCRLSEPINLVFVSIAAQRPVVSHPRIFLLLGAGSEAKIVENYLGLNGAAYFCNAVTELIGGSDAVVEHYRLQQESDAGLHVGTLEAVLQRGCQLTAYAITLSGALVRNNVRVVIDGEGAGCMLNGLYIVDGKQHVDNFTEIEHAKPRGSSIELYKGILSGSSHGVFNGKIVVHKDAQKTDARQTNKNLLLSENAVVNTKPQLEIYADDVKCSHGSTIGQLDPDALFYLRSRGLGREEARNLLSFGFASDIVGRIKIDSLRQRLDDLLVAKFRRN*