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PLM1_100_b1_sep16_scaffold_20403_2

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(625..1206)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 182.0
  • Bit_score: 161
  • Evalue 6.40e-37
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 187.0
  • Bit_score: 154
  • Evalue 2.90e-35
Tax=GWC2_Syntrophus_56_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.5
  • Coverage: 187.0
  • Bit_score: 160
  • Evalue 1.50e-36

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Taxonomy

GWC2_Syntrophus_56_31_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGTGTCTGAATCAATCAGCGACGCTGACTGCGTCCGGCGGATTATACAGCGCGGCGAAACAGACGCTTTCGAAATCCTGGTGCGGCGTCACGAAAAGACCATCTTCAATCTCGTCTATCGCATGCTTGGCGATTACGACGACGCCGCGGAGGTCTCCCAGGAAGTGTTTCTGTCGGCATACCGTGCCATCGGTCAATTTCGCGGCGATGCCAATTTTTCAACTTGGCTTTACCGCATCGCGCTCAACCACGCCACCACGCGGCGCAGAAGCATGAGCTCGCGCCAACAAAAAACCGTGCCGATTGACGACATGGAACCGCTGAGCGATCCCGAACTCGGGCCGGCGGAGACCCTGGAGAGAAAGGAAATACGGGAACGAGTGCAACTTGCGCTTAACAAGCTGGAACCGGACGACGCCACGATGATCTTGCTGAGGGACCTGCAGGACATTTCTTACGATGAAGTAGCACGCGTGCTAGAGATTCCAGTGGGAACCGTAAAATCCCGTCTGCATCGGGCGCGGCAAGCTCTCAAAACACAGCTCGCCACGTATTTCTGCGCAGGAAGGAAAGCCATATGA
PROTEIN sequence
Length: 194
MVSESISDADCVRRIIQRGETDAFEILVRRHEKTIFNLVYRMLGDYDDAAEVSQEVFLSAYRAIGQFRGDANFSTWLYRIALNHATTRRRSMSSRQQKTVPIDDMEPLSDPELGPAETLERKEIRERVQLALNKLEPDDATMILLRDLQDISYDEVARVLEIPVGTVKSRLHRARQALKTQLATYFCAGRKAI*