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PLM1_100_b1_sep16_scaffold_1651_9

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: 7715..8290

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 173.0
  • Bit_score: 134
  • Evalue 8.20e-29
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 32.7
  • Coverage: 171.0
  • Bit_score: 85
  • Evalue 9.50e-15
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 184.0
  • Bit_score: 208
  • Evalue 6.30e-51

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
GTGCGCTTTGATCTCCATGCAGTGTCCCTCGCGTCTCTGCCCGACGCCACCATCGTCGCCCGCTGCCGGACGGGAGACGAGCAGGCCTGGCACGAGCTCGTCGCCCGCTTCTCGCGCTACGTCTATGCCATCGCGACACGAGCGTTCCGCCTGCGCGAGCACGATGCGGAGGATGTCTTCCAAGAAGTCTTCGCCAGGACGTACGAGCATCTCGACCGCCTGCGCGATGACGAGGCGATCAGGCCCTGGATTGGCCAGCTGACACGGCGGCTCTGCATTGACCTGCTGAGAGCCAGATCGCGCGAAGAGCCCCTCGAGTCAGCGGTGGAACCACGCGGCGCCGACGAGACCATCGCGGAGGTGGAGGAAGCGCTCACCGTCCACGAGGCGTTGGTCTCCCTCCCAGAGCACTGCGGCGAGATTCTCGATCGCTTTTTCGCCCGTGACGAAAGCTACGCGACCATCGGCGACGAACTCGGTCTCCCTGCCGGGACGGTCGCGAGCCGCATCTCCCGCTGCCTGGCGAAGCTGCGAGAACAGCTCGAGGGAAGAAATTCAACCGGTGCCGCGTCTTGA
PROTEIN sequence
Length: 192
VRFDLHAVSLASLPDATIVARCRTGDEQAWHELVARFSRYVYAIATRAFRLREHDAEDVFQEVFARTYEHLDRLRDDEAIRPWIGQLTRRLCIDLLRARSREEPLESAVEPRGADETIAEVEEALTVHEALVSLPEHCGEILDRFFARDESYATIGDELGLPAGTVASRISRCLAKLREQLEGRNSTGAAS*