ggKbase home page

PLM1_100_b1_sep16_scaffold_548_9

Organism: PLM1_100_b1_sep16_Acidothermus_cellulolyticus_70_13

near complete RP 51 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 6502..7611

Top 3 Functional Annotations

Value Algorithm Source
Putative extracellular ligand-binding protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H1B4_ACTM4 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 257.0
  • Bit_score: 285
  • Evalue 5.60e-74
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK36480.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 258.0
  • Bit_score: 293
  • Evalue 2.90e-76
putative extracellular ligand-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 257.0
  • Bit_score: 285
  • Evalue 1.60e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGATCGACAAGATCGCCGGCAACGGCATCGTCCAGATGTCGCCGGCCAACACGTCGCCCAAGCTGACGGACTACGCCGACAAGGGGCCTCTACTTCCGCACGGCCCCGTCCGACGTTCTCCAGGGCCGTGTCTCGGTGACCTCGTGGTCTCCGACGGCAACGCAACGACCGGCATCCTCGCCCTCCAAGACGCCTATGGTGTGGGCCTTGCGGACAACATGGAGAAGGCCATCACCGACGGTGGCGGCGACGTCGTCGAGAAGATCATCTACGACCCAAAGGCCGCGGACTTCTCCGCCGAGGTGTCGAAGATCAAGGCGGCAGACCCCGACGCGATCGTCCTGATCGGCTTCGAGGAGACGAAGAAGATCATCCCCGAGCTCGTGAAGCAGGGCCTCGGGGTGAGCGAGAAGAAGTGGAACCTCGTCGACGGCAACCTATCCAACTACGGCATGGAGTTTCCGCCGAACACTCCCGTCGGCGCCAAGGGGACGCTGCCCGGCGCCGAGACCAAGAGCAACTTCCAGACGCGGCTCAGGGCGGTCGACCCGAAGCCGCGTGACTTCAGCTACGCGCCGGAGTCGTACGACGCGGCGGTAACCATCTCGCTGGCCGCCATCGCCGCCAAGAGCGACGCCGGGAACGCCATCGCGACCAAGCTGGTCGAGGTCGCACGGGCGGCACGAAGTGCTCGACGTTTGCCCGACTGCCAGAAGCTGCTCGAGCAGGGGCAGGACATCGACTACGACGGTGTCAGCGGCCCATCGAGTTCAGCGACCAGGGTGACCCGACCGAGGCGACGATCGGCATCTACCAGTACGGTGCAGACAACATCTACAAGAACCTCGAGTTCCGGGCCGGCAAGATCTGACCGGTCGCGCCGAGGACAACCGCGCGAGGGGCCCGGCAGCAAGCCGGGTCCGTGTGGTGTGCCCGGCGGCGCACGGCGGGGACTGCTTGGCTGGCTGCCCGACATAGACTCGCCGCTGTGGAGCAGAGACAAGCGGCGCTCCATGGCCTTGGAGCGGTCGTCTACTGGGCTGGCGCAGCGGTGCTGGTTGTCGCGGGCTTCCTCACGATCTTCAGCATCGGCGCCCCTCTGCTGTTGA
PROTEIN sequence
Length: 370
MIDKIAGNGIVQMSPANTSPKLTDYADKGPLLPHGPVRRSPGPCLGDLVVSDGNATTGILALQDAYGVGLADNMEKAITDGGGDVVEKIIYDPKAADFSAEVSKIKAADPDAIVLIGFEETKKIIPELVKQGLGVSEKKWNLVDGNLSNYGMEFPPNTPVGAKGTLPGAETKSNFQTRLRAVDPKPRDFSYAPESYDAAVTISLAAIAAKSDAGNAIATKLVEVARAARSARRLPDCQKLLEQGQDIDYDGVSGPSSSATRVTRPRRRSASTSTVQTTSTRTSSSGPARSDRSRRGQPREGPGSKPGPCGVPGGARRGLLGWLPDIDSPLWSRDKRRSMALERSSTGLAQRCWLSRASSRSSASAPLCC*