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PLM4_90_b1_sep16_scaffold_4405_1

Organism: PLM4_90_b1_sep16_Nitrospirae_41_18

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38 MC: 2
Location: 2..199

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, RpoE bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 65.0
  • Bit_score: 97
  • Evalue 2.90e-18
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 65.0
  • Bit_score: 84
  • Evalue 9.40e-15
Tax=RBG_13_Nitrospirae_43_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 65.0
  • Bit_score: 116
  • Evalue 8.50e-24

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Taxonomy

RBG_13_Nitrospirae_43_8_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 198
CAACAGAAAGTTCAGGGATGCATAAACTCTCTGGATAATGAGTTCAAAGAAGTTCTTGTTTTAAGAGACATTCAGGGGTTTTCTTATGATGAGATAAGTGATATGCTTAAGATACCTGAGGGTACTGTTAAATCAAGGCTGTCCAGGGCAAGATATGCTCTTAAAGACTGTTTAAAGAAAATTACTGGAGAACTATAA
PROTEIN sequence
Length: 66
QQKVQGCINSLDNEFKEVLVLRDIQGFSYDEISDMLKIPEGTVKSRLSRARYALKDCLKKITGEL*