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PLM4_90_b1_sep16_scaffold_787_7

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(5480..7273)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Geobacter RepID=A5G8S3_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 605.0
  • Bit_score: 678
  • Evalue 4.80e-192
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 605.0
  • Bit_score: 678
  • Evalue 1.40e-192
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 597.0
  • Bit_score: 941
  • Evalue 4.30e-271

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Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1794
ATGGCGAAGGGTGGAAAGATCAAAGAAGTTGAACAATTGATTCATATGGAAGGGGAGAAAGGATTTCTGACCTTCGACGAGTCGAACGATATCCCTCCCAACGATATTGTCTCCTCTGACCAGATTGATGATGTCCTCATGATGTTCGACGAAATGGACATCGATGTCGTGGATGACCTCCAGGGGCTGAAAGTGGAGGAAGAAAAGGCCATCGAGAAGGATGAAGAGGAAGGCGATGAGTTAGAGGTGGAGACCTTTGGGAGGGCCACGGACCCCGTCCGGATGTATCTCCGCGAGATGGGGTCGGTTTCCCTCCTGACGCGAGAAGGGGAGGTGGAGATCGCCAAAAGGATTGAAAGCGGTAAAAGAGCAGTGCTGAGCGTCGTCTTAAACTGCCCTATGGCGGTTAAAGAGGTCATCAATCTGGGCAGTATGATTAAGGCCGGAAAGGTAGAGATTCGGGAGGTCACCAACGAGATCGACGAGGAGGAAACCAGCTTTGAGGAAGAGCAGATCCAGAAGAAGCAGATTTTAGACCTCATCGAAAAGATTAAGCGAAAAGATGAAGACCTCCGGGGACTGCTGAAAGGGAAGGCGGTGCCGAGGAGGAAGGTCCAGAAGCAGGGGAAGAAGAAACAGAAAGAGACAAAGAGAAAACAAAAGGGGATGAAAAGGAGACAGGAGGAGATTAAAAAACGACAAGAAGAGATCCTGGAATTCTTCAACCGGATGAATCTGAGAGATACTCAGATTCATAAGATCGTTCAGAAGATGAAGCAGATGCTGAACCGGCTGGAGAAAGGGGAGAGTGAAATCAAGAAGATCGAAGATAAGTGGGGGATTTCTGTTCAGGAGGCACGAATCTATCTGAAGAAGTTGAAGGGAAGGAGTGTGAGTGAGAAGAAACTTCTTCGAACCCGAAAATTGAATAAAGGCGATCTCCAAGAGATTTCCCGAGCGGTCATGGGGGTCCAAAAGAAGATCCACAAGGTGGAAACGGAATGTGGCCTGACCGCTGACAGGTTGGCCGGAGCGGTGAAAGCCATCGTGGAAGGGGAGACAAGAGCCAAGGAGGCCAAGAGTGAACTGGTGAAGGCGAACTTGAGACTGGTCGTTTCCATTGCCAAAAAATATACGAATCGTGGGCTTCAATTCTTAGACCTCATTCAAGAAGGGAATATCGGGTTGATGAAGGCGGTGGATAAATTTGAATACCAGCGAGGTTACAAGTTTAGTACCTATGCGACCTGGTGGATCCGGCAGGCGATCACACGAGCCATTGCTGATCAGGCGCGGACCATTCGGATCCCCGTTCATATGATTGAGACGATCAATAAATTGATCCGGACCTCCAGATACCTCGTCCAGGAGATAGGGAGAGAGCCCACTCCCGAAGAGATCGCCGAGAAGATGGATATGGTTTTGGATAAGGTGAGGAAGGTGCTGAAGATTGCCAAAGAGCCTATTTCCCTTGAAACACCCATCGGCGAAGAGGAAGATAGCCACTTAGGGGATTTCATCGAAGACAAAGCAGTCATTTCCCCGCAGGAGGCTGTGATCAGCGCAAATCTATCAGAACAAACCCAAAAGGTCCTGGCCAGCCTCAACCCCAGAGAGGAGAAGGTGTTGAGGATGCGGTTTGGAATTGGAGAAAAGTATGACCATACGCTGGAAGAAGTGGGACAGGATTTTGATGTTACCCGGGAAAGAATCCGGCAGATCGAGGCAAAGGCATTAAGGAAATTACGACATCCCAGCCGGGCAAGGAAGTTGAAAAGTTTCCTTGAAACGTAG
PROTEIN sequence
Length: 598
MAKGGKIKEVEQLIHMEGEKGFLTFDESNDIPPNDIVSSDQIDDVLMMFDEMDIDVVDDLQGLKVEEEKAIEKDEEEGDELEVETFGRATDPVRMYLREMGSVSLLTREGEVEIAKRIESGKRAVLSVVLNCPMAVKEVINLGSMIKAGKVEIREVTNEIDEEETSFEEEQIQKKQILDLIEKIKRKDEDLRGLLKGKAVPRRKVQKQGKKKQKETKRKQKGMKRRQEEIKKRQEEILEFFNRMNLRDTQIHKIVQKMKQMLNRLEKGESEIKKIEDKWGISVQEARIYLKKLKGRSVSEKKLLRTRKLNKGDLQEISRAVMGVQKKIHKVETECGLTADRLAGAVKAIVEGETRAKEAKSELVKANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIAEKMDMVLDKVRKVLKIAKEPISLETPIGEEEDSHLGDFIEDKAVISPQEAVISANLSEQTQKVLASLNPREEKVLRMRFGIGEKYDHTLEEVGQDFDVTRERIRQIEAKALRKLRHPSRARKLKSFLET*