ggKbase home page

PLM4_90_b1_sep16_scaffold_4080_3

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 665..1288

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 199.0
  • Bit_score: 249
  • Evalue 1.90e-63
50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 200.0
  • Bit_score: 231
  • Evalue 2.00e-58
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 207.0
  • Bit_score: 356
  • Evalue 1.60e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGACTCAAGTCTTTCTCGAAGATGGCTCCGTCATACCGGCGACCGTCATCGAAGTCGGCCCTTGCTCGGTGATTCAGAAGAAAACCAAGGAGACGGACGGCTACAATGCCCTTCAACTTGGTTTCCTTCCGAAGAACAGCCAGCGGGTAAACAAACCCCTCTCAGGACATTTTAAGAAAGCAGGAAAAGGAGCTTTTTATTATATCAAGGAATTCCGTGTAGAGGACTTAGGAGGGTATGAGTTAGGTCAAGAAGTTACCACAAGTCTTTTTAAACCCGGGGATGTTGTGGATGTCACTGGCTTGAGCAAGGGGAGAGGGTTTGCAGGGGTAATCAAACGCCATAAATTTCACGGTTCTCCTGGATCTCATGGAACTCATGAATATTTCCGTCATGGAGGCTCCGTCGGTTCGAACACCTTTCCGCATCATACCTTTAGAGGATTAAAGATGCCGGGGCATATGGGGAACCGGAGAGTCACGTTACAAAATATCAAGGTCGTGGATGTCAAAGAGGATCAGAACCTTCTCCTTCTCAAAGGAGGCATTCCGGGAAGTCCGAGCGGTTGGGTTCTCATCCAGAGTGCGACCAAGAAGAAAGCTTCTGCTGCCCCATCGGTTTAA
PROTEIN sequence
Length: 208
MTQVFLEDGSVIPATVIEVGPCSVIQKKTKETDGYNALQLGFLPKNSQRVNKPLSGHFKKAGKGAFYYIKEFRVEDLGGYELGQEVTTSLFKPGDVVDVTGLSKGRGFAGVIKRHKFHGSPGSHGTHEYFRHGGSVGSNTFPHHTFRGLKMPGHMGNRRVTLQNIKVVDVKEDQNLLLLKGGIPGSPSGWVLIQSATKKKASAAPSV*