ggKbase home page

PLM4_90_b1_sep16_scaffold_7198_3

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(2124..2912)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 249.0
  • Bit_score: 197
  • Evalue 1.10e-47
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 250.0
  • Bit_score: 180
  • Evalue 3.90e-43
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 252.0
  • Bit_score: 429
  • Evalue 1.80e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCCTCTCTTTAAGACAAATGCCATTGTCATTCGATCCACAAACTACGGCGAGTCCGACAAGATCGTTACCTTCTTCACCAGGGATTTTGGAAAGCTGAAAGGAATTGCCAAAGGGGCGAGGAGGAGCAGGAAGCGATTTCAGAATGCCCTTGGCCTTTTTTCTCATCTTCGCCTCATCTTTTTCGACAAAGAAGGGATGGGGTTGGTGAGGGCTGAGGGTTGTGATATCCTTCACTCTTTTCCAAAAATCAGGGAGGACCTCAAAAAAATTCTTTACGGAAACTATTATCTTGAATTAGCGAACGAGATGGCCGGAGAACGGGAAGGGAATCGAGAAGTCTTCGAACTTCTTTTGTCCTTCTTATCGGATCTTGAAGGAATGGAGCCGCAGGAGGAACAATTGAGACTTTTTGAGATCCGGATGCTCTCCCTCTTCGGCTACCGGCCCAATATGGGGAGATGTAATCTTTGTAAAAAGGATTGGGAGGATTTGAAAGAGATTCCGGCAGTCTTTTTCTCACTTGAAAAAGGGGCTTTGGTTTGTGAAAAGTGCTCGAAGATGTGGAATGACCTCATCCCGTTCTCCTTAGGAACGGCCAGATTAATAGAGAAGATCTCCCAGGCGGAATTGCCCAAGATTCAAAGGTTGAAATTCACCCATCAGTCCTTATCCGAGAGCCGGGAGATTCTCCCCAGATTTATTAGTTATCAATTAGGAAAGGAATTGAAGTCGCTGAAAACACTGGGGGAGATTTTGCACAGCACCCTTACAGAGAAAAGGAATTAA
PROTEIN sequence
Length: 263
MPLFKTNAIVIRSTNYGESDKIVTFFTRDFGKLKGIAKGARRSRKRFQNALGLFSHLRLIFFDKEGMGLVRAEGCDILHSFPKIREDLKKILYGNYYLELANEMAGEREGNREVFELLLSFLSDLEGMEPQEEQLRLFEIRMLSLFGYRPNMGRCNLCKKDWEDLKEIPAVFFSLEKGALVCEKCSKMWNDLIPFSLGTARLIEKISQAELPKIQRLKFTHQSLSESREILPRFISYQLGKELKSLKTLGEILHSTLTEKRN*