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PLM4_90_b1_sep16_scaffold_8119_4

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(2559..3131)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWF2_Lentisphaerae_52_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 181.0
  • Bit_score: 201
  • Evalue 7.10e-49
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 174.0
  • Bit_score: 149
  • Evalue 9.10e-34
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 177.0
  • Bit_score: 272
  • Evalue 3.50e-70

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Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGACAAAGAGATACCGAGCGAAGATTTAATGGCCAGGATTGCCAAAGGTGACGATGATGCGTTTGAAATCCTGGTAAATCGTCATCAGACTTCCATTTTGAATCTTATTTATCGTTTCATTGGGGACAGGACGCAGGCGAAAGACCTGGCCCAGGAAGTGTTTATCCGGGTTTGGCAGGCAGCCAAAACCTACAAACCCGAGGCCAAATTTACAACCTGGATCTACCGTATAACAGCTAATCTATGTATCAATGAGCTGAAGTCCTCCCGCCGAAGGAAATTGTTCCAATTTCTTCGATTTGGAGAAGACCAGGAAAACACGATTGAGGAAGTCCTCGTCGATGATTCACCTTCGCCAGAAGATCTGCTATTGTCCCGGGAGCAGAGCCGCCGGATTTCCGATGCTCTTCAGAGTCTGCCTGGGAACCAGCGAATGGCCTTGGTTCTGAGGAGATACGATAACCTTTCCTACCAGGAAATCGCCAAGATACTCAACTGTTCCGTCTCGGCCGTTGAGTCCCTCCTCATCCGGGCAAAAAGAAACCTTCAAAAAAAATTAAAAAATTTGTAA
PROTEIN sequence
Length: 191
MDKEIPSEDLMARIAKGDDDAFEILVNRHQTSILNLIYRFIGDRTQAKDLAQEVFIRVWQAAKTYKPEAKFTTWIYRITANLCINELKSSRRRKLFQFLRFGEDQENTIEEVLVDDSPSPEDLLLSREQSRRISDALQSLPGNQRMALVLRRYDNLSYQEIAKILNCSVSAVESLLIRAKRNLQKKLKNL*