ggKbase home page

PLM4_90_b1_sep16_scaffold_9362_1

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: comp(1..279)

Top 3 Functional Annotations

Value Algorithm Source
2-methylcitrate dehydratase Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A671BE similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 86.0
  • Bit_score: 63
  • Evalue 6.70e-08
Uncharacterized protein {ECO:0000313|EMBL:KFD41228.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 92.0
  • Bit_score: 70
  • Evalue 1.00e-09
2-methylcitrate dehydratase similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 91.0
  • Bit_score: 58
  • Evalue 7.90e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptococcaceae bacterium SCADC1_2_3 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 279
ATGGGTGAAACTGAAATCCTAGCTAGTTACGTTGCCAATTCGAATTATGGAGATCTACCGGCGAAGGTCATCATAGACGCAAAGGAGAGAATCGGTAATGCGATTGCGTGCGGGTTAGCGGGCAGGAAGACTCGCGAAGGTGATGTCCTTATCGACATGATGAAGGAAATAGGCGGCAATCCAGAAGCAACGGTCATTGGCGATCGGACCCGACTTTCGTTTATGCAGGCTGCCCAGGTGAACAGGGTTCTCATGCATATGATGGATTATGACGATGAC
PROTEIN sequence
Length: 93
MGETEILASYVANSNYGDLPAKVIIDAKERIGNAIACGLAGRKTREGDVLIDMMKEIGGNPEATVIGDRTRLSFMQAAQVNRVLMHMMDYDDD