ggKbase home page

PLM4_90_b1_sep16_scaffold_14398_4

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 2153..2536

Top 3 Functional Annotations

Value Algorithm Source
Cupin domain protein bin=GWC2_Deltaproteobacteria_66_88 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 120.0
  • Bit_score: 132
  • Evalue 2.70e-28
Cro/Cl family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 118.0
  • Bit_score: 114
  • Evalue 2.20e-23
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 128.0
  • Bit_score: 233
  • Evalue 9.40e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGAAGAAGAAAGGGATGTCGAAGAGATCCACGTTGGAGAAAAGGTTAAGTCTTTGAGAGAGAAGAAAGGGCTTTCACTGAAGGAATTGGCCGATTTAACTGGATTTTCTGCAGCGTTGCTCTCCCAGATGGAAAACCATCTTGTTTCCCCTTCCCTTGGAACAATGATCAAACTGGCGAAAGCATTGGGGGTCCAAGTGGGCGACTTTTTGGGTGAAACAGAGGGAGAACCTTTTGCGATTGTCAGGAAGGACGAACGAAAGACGGTTTCTCGATTTGCCTCAAAAGAAGGAGTGAAGTATGGTTATTCCTACGAGTCTTTGGGGTTTGAGAAGAAAAACCGCCACATGGAGCCATTCATTGTGACTCTGGAACCCGCCACC
PROTEIN sequence
Length: 128
MEEERDVEEIHVGEKVKSLREKKGLSLKELADLTGFSAALLSQMENHLVSPSLGTMIKLAKALGVQVGDFLGETEGEPFAIVRKDERKTVSRFASKEGVKYGYSYESLGFEKKNRHMEPFIVTLEPAT