ggKbase home page

PLM1_100_coex_sep16_scaffold_3733_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(275..994)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein Tax=Afipia sp. 1NLS2 RepID=D6V7R8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 239.0
  • Bit_score: 274
  • Evalue 8.30e-71
ABC transporter {ECO:0000313|EMBL:KJB94313.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 242.0
  • Bit_score: 279
  • Evalue 3.60e-72
Branched-chain amino acid ABC transporter, ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 237.0
  • Bit_score: 264
  • Evalue 2.40e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
TTGGCGACTGACGCGCTGGCGCTGAGCGGGATCGACGCGTTCTACGGCGACAGCCACGTGCTGCACGACGTGTCGCTGCGCCTGGGTGGGGGCCGGCTGCTCGGTCTGCTCGGCCGCAACGGGGCCGGCAAGACGACGACCATGAGCGTGACGGTGGGGCTGCTGCCGCCGCGCCACGGCACCGTCACGATCGACGGCCGCCCCGTCACCGGCAGCACGCCGGAGGCCATCGCCGCCCACGGCGTGGCGCTGGTGCCGCAGGGCCGCCGGGTGTTCCGCAGCCTCACCGTGCGCGAGAACCTCGCGGTGGCCGGGCGCCGGCCGCGCGACGGGCGCCGGGCGGCGTGGACGCTCGACACCGTCTACGGCGTGTTCCCGCGGCTGCGCGAGCGCCACCGGCAGCTCGCCGGCTCGCTCTCGGGCGGCGAGCAGCAGATGCTGGCGATCGCTCGCGCGCTGATGGCCAACCCCCGCGTGCTGCTGATGGACGAGCCGTCGGAGGGCCTGGCGCCCCAGATCGTCGCCGAGGTCATGGCCACCATCCGCAAGCTGAAGGCGGACGGGCTGTCCATCGTGCTGGTCGAGCAGAACGCCCGGCTCGTCTTCGAGGTGGCCGACGACGTCGTCATCCTCAACAGCGGCCGCGTCGTCTTCGCGGGGCCGGCGGGCGAGCTGACCGCCGCCGGCGTCGATCTCCGCCAGCACCTCGGGATTTATTAG
PROTEIN sequence
Length: 240
LATDALALSGIDAFYGDSHVLHDVSLRLGGGRLLGLLGRNGAGKTTTMSVTVGLLPPRHGTVTIDGRPVTGSTPEAIAAHGVALVPQGRRVFRSLTVRENLAVAGRRPRDGRRAAWTLDTVYGVFPRLRERHRQLAGSLSGGEQQMLAIARALMANPRVLLMDEPSEGLAPQIVAEVMATIRKLKADGLSIVLVEQNARLVFEVADDVVILNSGRVVFAGPAGELTAAGVDLRQHLGIY*