ggKbase home page

PLM1_100_coex_sep16_scaffold_6565_3

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1563..1886)

Top 3 Functional Annotations

Value Algorithm Source
Putative regulatory protein, FmdB bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 105.0
  • Bit_score: 132
  • Evalue 2.30e-28
regulatory protein, FmdB similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 111
  • Evalue 9.10e-23
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 105.0
  • Bit_score: 152
  • Evalue 2.30e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGCGGCCGCGCCGGCGTGCCCGCGTTGCGCAGGCACCAGCCTCACCCGTCTGATGTCACGGTTCTCGACGGTCAAGAGCGAGGAGGCGCGCCTGGAATCCCTGGCCGACTCCGCGTCAGGCGGGGACATCGACGAGAACGATCCCGCCAGCGTCGCCCGGTTCATGAAGAAGATGGGGCGCGAGTTCGGCGACGACCTCGGCGACGACTTCGAGTCGGCCATGGACGAGGCCATGGCCGAGGGCGAGGGGGGCGCCGAAGGCCCGGGGCCGGGCGAGGGAAGCGCGGAATCGGTCGACGCCGCTGGCGGATCAGAACTCTAG
PROTEIN sequence
Length: 108
MAAAPACPRCAGTSLTRLMSRFSTVKSEEARLESLADSASGGDIDENDPASVARFMKKMGREFGDDLGDDFESAMDEAMAEGEGGAEGPGPGEGSAESVDAAGGSEL*