ggKbase home page

PLM3_60_b1_sep16_scaffold_1291_8

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: comp(5407..5922)

Top 3 Functional Annotations

Value Algorithm Source
putative Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 169.0
  • Bit_score: 167
  • Evalue 1.70e-39
Ribosomal RNA small subunit methyltransferase E Tax=Candidatus Nitrospira defluvii RepID=D8PDZ9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 169.0
  • Bit_score: 167
  • Evalue 6.00e-39
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 157.0
  • Bit_score: 196
  • Evalue 1.70e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCGGTTTTTTTCATCACCCCAGACCAAGTGCAGAATGGGACCGCGACCATCACGGGTCCCCTGCTCCACCACGTACGAACAAGCCTCCGTACCCGGATCGGCGAGACTCTCTGGGTGGGAGATGACCGACGCCGTCGGCACCTGATCCAGGTAACCCAACTCGACCGTCACCAACTTGTCGGCCAGGTCCTGGAACAGCACGACGGACCAATACGCCGAAGTCCGACTGTCACGATCGGACAAGCCCTCCTGAAAAGCGATCGAATGGACTGGATCATTCAGAAAGCAACCGAGCTCGGCGCGGCCTCGTTCGTCCCGCTCGTGGGACGATACGCCATCGTTCGGCCCAAAGCAGCGCGTATCGCGACTCAACAGCAACGTTGGCAGCGGATCGCGCTCGAAGCAGCTCAGCAGGCCGAACGTTGGGAGATTCCAGCCATTGCCGCCCCATGCAAGGCCGGTGAGTTTTNNNNCCAAACAGTCTCCTGCGGATGCGAACTTGATCTTGAGTGA
PROTEIN sequence
Length: 172
MPVFFITPDQVQNGTATITGPLLHHVRTSLRTRIGETLWVGDDRRRRHLIQVTQLDRHQLVGQVLEQHDGPIRRSPTVTIGQALLKSDRMDWIIQKATELGAASFVPLVGRYAIVRPKAARIATQQQRWQRIALEAAQQAERWEIPAIAAPCKAGEFXXQTVSCGCELDLE*