ggKbase home page

PLM3_60_b1_sep16_scaffold_363_11

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 5999..8278

Top 3 Functional Annotations

Value Algorithm Source
Putative Lipopolysaccharide biosynthesis protein Tax=Candidatus Nitrospira defluvii RepID=D8PH59_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 782.0
  • Bit_score: 782
  • Evalue 2.30e-223
putative lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 782.0
  • Bit_score: 782
  • Evalue 6.50e-224
Putative Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CBK42596.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 782.0
  • Bit_score: 782
  • Evalue 3.20e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 2280
ATGAATACACGATTGCTCACACCTGAAGACTATTTGAGAGTCATCATCCAGAGAAAGTGGCTCATTGCGGTGACAATTGTTGTCTCGCTAGGACTAGCCTGGGCGGTATGCCTCTGGTTGCCTAAGAGTTACCGATCCACCACCTTACTGCTGGTCGAGCGCCAAAAGATTCCGGAGCAATACGTGCAAAGCGTGGAATCAGCCGCGCGTCATGACCGACTGGTTGAAGTCCGTCAACTTGTGTTGAGTCGAAAGCTGCTCAGCCAGGTCGCCGCAGAGCTCAATCTCCATGGGTATGAAAAGGATCAACCTGATTCAGCGCGATCGGAGGGTGCCCTCAGGGCGATACGCAACACAATCTCCATTGAGCTATCGAAGGACGAGTCCTTCTTAACAATTTCCTTCGCACACGAGTTACCGCTGATGGCCAGGGATGTGACTGCAAGGCTGGCCTCGTTGTTTATCAAGGAAAAAAATATAAGCGGGGAGCAGCTCGCCGAAGGAGCAAGCGAATTCCTGATGCATGAACTCATCGCTGCCAAAGCGGACCTCGAAGTGAAAGAGAAGGCCATCTCTCTCTTCAAGCAGGAACATATGGGGGAATTACCGCAGCAGATAGAAGCCAACCTCCGTACGCTTGACCGACTTCAAGCCGAGATGACCGCCCAATCTGAGACAGAGAATAATCTGAATACTCGGCTCGCCTCAATTGATAAAGAACTCAAAGAATATGAGGAAAGCGAGACTCTTGCCTCCGTACCTAGGCGAAGAGGGGATCCTCGTCTTGCGCGCCTCAAAGAGCTGGAACGATCCTTGTTTGCCCTCACGGCAAAATATAAGGACAACTACCCGGATATCTTCGAAATCAGGCAAGAAATTAAGAGGCTGAAGGAGATGCCTACGGAAAAATATATCGCGATGCAACAGGACTTACAGGAAGAGTCACCAGGGACGAAAACCGTCGATCCTTATCAGCGGGAGCTATTGAAGCAGCGGGAGCAACTCATAGCTGAGCTCGCTGCGGTTAAACGTCACCAAAACCAAATCGCTGCGGAAAAGGCGAACTACCAAGGAAGAGTCGACCGGACACCAGTTCATGAGACGAAGTTAACGACGCTAATGCGGGATTATGACAACATGCAAAAAAATTACCAAGCCCTGCTTGATAAAAAGCTCAGTGCCGGTCTTCAAGGGAATTTGGAGAAACGAAGGAAGGGGGAACAAGTTCAGATCATTGACCATGCCAATTTACCTGGGATCCCTGAGACGCCGAATGTTCTGCGTATCATGTTGGTTGGCCTAGGGCTTGGATGCGCTCTTGGCGTCGGGGCGGCTGTCGCGTTGGAATTCTTAGGGAGAGGATTTCGGTTTCCTGAGGAGGCCGAGCTGCTGTTGGGCCTTCCCATTCTTGCCTCGATTCCATTATACCAGAGTGCGTTTGGCGGACCGGCTAAACCTTTACCGGATCAGACCGGGGTACCAGCCTTGATCTCGAGCGAGAGGCACAGACGACAGCTGCCTTCTCAGAGCCAATCCCGAACGGGGAACGGAAGAGCCAGGCGCGATCTAACTGCTACGCGCGGGTTCTCACCCGAGCTGAACCTGGTCTCTATGTGGAGGCCCAGATCCTCTGTGGCCGAACAATTCCGTGTTGCTGCGACTCGGCTAGAGCTGATGGGAGGGGGGCGTAAGAGCACTGTCATAGTTGTGACCAGCGCCCTAATGGGAGAGGGGAAGTCATCCACCGCTATCAACCTTGCATATGTCCTGGCGAAGGATCTGGACAAGACGACGATGCTGATCGACTGTGATCTCAAGAGGCCCATGCAGCACGTGTATGCTGGCATTGAGTTGGAACCAGGGCTCACCGAGGTCCTCTATGGAGACAAGCCCGTTGATGACTGCGCGCGGCGACTGGGGGAATTGTCCCTTTGGGCCTTACCGGCCGGCTCCTTCGAGGGCCGGCCGCTGGGGTTGTCCAAAATACAACGACTCGGCAATCTTCTTACCGAACTCCGGCCTCGGTTCGATTACATAATCGTGGATGCTCCACCCATCCTGCCCTTGGCCGACATGAATGTGCTGGCCAGCATGGCCGATGTTCTACTACTCGTCATTCGGGCAGGGGCAACGGGCCAGGCTGTAGTGCAGAAGGCGCTCAGAATAGTTAGCGAGGCGAGCGAAGCAAGGATCATTCTGAACGGGGTTGATAATGTGTCGACCCCGTATTACATGCGGCAAGACTACTACCTTGGGACCGACGTTGAAAAACGCTTATGA
PROTEIN sequence
Length: 760
MNTRLLTPEDYLRVIIQRKWLIAVTIVVSLGLAWAVCLWLPKSYRSTTLLLVERQKIPEQYVQSVESAARHDRLVEVRQLVLSRKLLSQVAAELNLHGYEKDQPDSARSEGALRAIRNTISIELSKDESFLTISFAHELPLMARDVTARLASLFIKEKNISGEQLAEGASEFLMHELIAAKADLEVKEKAISLFKQEHMGELPQQIEANLRTLDRLQAEMTAQSETENNLNTRLASIDKELKEYEESETLASVPRRRGDPRLARLKELERSLFALTAKYKDNYPDIFEIRQEIKRLKEMPTEKYIAMQQDLQEESPGTKTVDPYQRELLKQREQLIAELAAVKRHQNQIAAEKANYQGRVDRTPVHETKLTTLMRDYDNMQKNYQALLDKKLSAGLQGNLEKRRKGEQVQIIDHANLPGIPETPNVLRIMLVGLGLGCALGVGAAVALEFLGRGFRFPEEAELLLGLPILASIPLYQSAFGGPAKPLPDQTGVPALISSERHRRQLPSQSQSRTGNGRARRDLTATRGFSPELNLVSMWRPRSSVAEQFRVAATRLELMGGGRKSTVIVVTSALMGEGKSSTAINLAYVLAKDLDKTTMLIDCDLKRPMQHVYAGIELEPGLTEVLYGDKPVDDCARRLGELSLWALPAGSFEGRPLGLSKIQRLGNLLTELRPRFDYIIVDAPPILPLADMNVLASMADVLLLVIRAGATGQAVVQKALRIVSEASEARIILNGVDNVSTPYYMRQDYYLGTDVEKRL*