ggKbase home page

PLM3_60_b1_sep16_scaffold_4518_4

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: comp(3718..4542)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BS0_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 253.0
  • Bit_score: 94
  • Evalue 1.00e-16
Polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 253.0
  • Bit_score: 94
  • Evalue 2.90e-17
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 135.0
  • Bit_score: 141
  • Evalue 1.40e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCATGGCACTTCACCATCGATGTTGACTGGGTCCCTGGTTCCGAGGTCGGGCTGGAAGGCTTGCTAGATTTCTGTGATCGACGGAAGCTCAAGGCCACGATTTTTGTTGCCGGGCGGTTTGCGGAAACCTATGCGGATCTGATCAGAGATTGTCGGCGGCGAGGGCACGAACTCGGCACGCATGGGTGGGAACACGGTGGCCTCGAGAAAGACGAGGATTTCAGGTCAGCCAGTTATGACCAGCAGCGAGAATGGATCCGGCTGGCCACGGAGGCCGTGGAGAAAGCCTCAGGGGTTCGCCCCGTAGTCTTCCGCGCACCGAGCTTGTGGATCAGCGAAACGACCTTGCGCGCGCTCGAAGACGAGGGATACCGCTACGATTCATCTGTTCCGGCGAGGCGATTTGATTGCGGCTTCGGCCGGGTGCACTACCTGAAATACTTTCGTGCTCCGAGTGAGCCGTACCGCCTCTCGTCATACCACCTGCGCCTGCCGGGACACAGCTCGATCATCGAGATGGCCCCCTCAGCGTTCCTGCTCCCAACCAACATGGCAACGCTTCGGGTGCTCGGTCTGCCGGTGATGAAGTGGATGGTCCGCCGGATCTCCCGATGTTCTTCGCGACTGGTGTTCTATTGCCACCCCTACGAATTCGTGCATTCGCATCGGCAATCCTTCCCGCGCAACATGTCCAAATGGAATATGCAGGGCATGAGACCGGAGAACTTCTCCCTCCTTGACGCATTCGTCGAACACATGATGCGGCGAGGACATTCTTCTACTCTGTTTGCGGACTCGTTAAGCAAGGCGCGTGATTCATAG
PROTEIN sequence
Length: 275
MPWHFTIDVDWVPGSEVGLEGLLDFCDRRKLKATIFVAGRFAETYADLIRDCRRRGHELGTHGWEHGGLEKDEDFRSASYDQQREWIRLATEAVEKASGVRPVVFRAPSLWISETTLRALEDEGYRYDSSVPARRFDCGFGRVHYLKYFRAPSEPYRLSSYHLRLPGHSSIIEMAPSAFLLPTNMATLRVLGLPVMKWMVRRISRCSSRLVFYCHPYEFVHSHRQSFPRNMSKWNMQGMRPENFSLLDAFVEHMMRRGHSSTLFADSLSKARDS*