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PLM3_60_b1_sep16_scaffold_4874_3

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 2462..3346

Top 3 Functional Annotations

Value Algorithm Source
rluB; 23S rRNA pseudouridylate synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 258.0
  • Bit_score: 390
  • Evalue 2.80e-106
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 258.0
  • Bit_score: 390
  • Evalue 1.40e-105
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=B3U4L2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 258.0
  • Bit_score: 390
  • Evalue 9.80e-106

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 885
TTGATCGCTGTAGAAGCCAGCCGACTCCTCGATAGACAAATAGTCTATATGGAAATTCGACTCCAAAAATTGATTGCTGGAACCGGGCTCACGTCGCGGCGGAAGGCAGAGGAGATGATCGCGGCGGGCCACGTGACCGTGAACGGGAAGGTGGTCCGCGAGCTCGGCACTCGTGTTGATCCGGAGCGTGACCACGTGAAGGTGAATGGCCGGCATCTGAAGGATGTGCAGCCGTATGCCTACCTCCTCCTCAATAAGCCTAAGAATGTCATGTCCACTTTGGATGATCCTGGTGGCCGGCCAACAGTGAAGCACCTTCTGCCAGGAGTCACTGTCCGAGTCTTCCCGGTTGGACGGTTGGACTTTGATAGTGAGGGGCTGATGCTGCTGACCAACCACGGCGATCTGGCCCAAGCTCTGTTGCACCCCCGGTACCATGTCCCCAAGACGTATCTGATTAAAGTGAAAGGGGTATTGACGGACGAAGAGATCAAATCCTTAGAACGGGGCGTGAAGTTAGAGGACGGCGTGACCAGCCCGGCAACGGTGAAAAAAATCAGAAAGGCGAAGCAGAACTCCTGGCTGGAGATCACGATTCATGAGGGGCGGAAACATCAAGTGAAGCGCATGCTGGAAGCGGTGAGGCATCCTGTCTTGAAGCTGGTCCGGGTTCGGTTTGGTCCCTTGACTCTGGAAGGTCTGGCTCCAGGCGAGTACCGCTATCTCACGGACCGAGAGGCGAATACGTTGCGCGACCTCATGCGCAGTCGCACGGACCGTGAGGCGTCAGGCGTGAGGCGTGAGGCGTCAAAGCAGAAGACCTCTTCACGCTCCTCTCGCCTCACCTCTCACGCCTCACGGGTTTCTATGCGGAGAAGCGCATGA
PROTEIN sequence
Length: 295
LIAVEASRLLDRQIVYMEIRLQKLIAGTGLTSRRKAEEMIAAGHVTVNGKVVRELGTRVDPERDHVKVNGRHLKDVQPYAYLLLNKPKNVMSTLDDPGGRPTVKHLLPGVTVRVFPVGRLDFDSEGLMLLTNHGDLAQALLHPRYHVPKTYLIKVKGVLTDEEIKSLERGVKLEDGVTSPATVKKIRKAKQNSWLEITIHEGRKHQVKRMLEAVRHPVLKLVRVRFGPLTLEGLAPGEYRYLTDREANTLRDLMRSRTDREASGVRREASKQKTSSRSSRLTSHASRVSMRRSA*