ggKbase home page

PLM3_60_b1_sep16_scaffold_6916_9

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: comp(7853..11074)

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116, ECO:0000313|EMBL:CBK42254.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 996.0
  • Bit_score: 1517
  • Evalue 0.0
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5) similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 996.0
  • Bit_score: 1517
  • Evalue 0.0
Carbamoyl-phosphate synthase large chain Tax=Candidatus Nitrospira defluvii RepID=D8PG67_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 996.0
  • Bit_score: 1517
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 3222
ATGGCTCAATACGTCACGCGAGAAGAAAGGATTGCTGTGCCCAGACGCCATGATATCTCTTGCATACTGCTGATCGGGTCAGGCCCGATCGTCATCGGGCAAGCCTGCGAATTCGATTATTCCGGCACGCAGGCCTGCAGGGCGTTGAAGGAAGAGGGGTACCGGGTTGTGTTGATTAACAGCAATCCGGCCACGATCATGACTGATCCGGAACTGGCTGATCGGACCTATATCGAGCCCATTACGCTGGAGGTCGTGGAGCGGGTGATCGAACGTGAACGGCCGGATGCGCTGCTGCCGACGATGGGAGGGCAGACTGCGCTCAACATCGCGGTGGGGCTGGCCGAACGTGGGACGCTCGCCAAATACAAGGTCCAGTTGATTGGAGCCTCCTCCGAGGCGATCCATAAGGCCGAGGACCGTGGAGCCTTCAAGCAAGCCATGCAGCGAATCGGACTCAAGACTCCAGACAGCGGCTCTGCCAGGACTCGGGAAGAGGCGTTCAAGGCCGTCGAACAGATCGGCTTCCCGGTTATCGTCCGTCCTTCCTTCACCCTGGGAGGAACCGGCGGCAACATCGCGTACAACCGCGAGGAGTTCGAGCGCGTCGTGGACTGGGGGCTGGCCATGAGCCCGGTGGGGGAAATCCTGGTCGAACGGTCCGTCATCGGCTGGAAGGAGTTTGAGCTCGAGGTGATGCGGGATCTGAAGGACAATGTGGTGATCGTCTGTCCGATCGAGAACCTTGATCCGATGGGCGTCCATACCGGCGACAGTATCACCGTCGCCCCGGCGATGACCTTGACGGACAAAGAGTATCAGGTCATGCGGGATGCAGCGGTGCGGATCATTCGGGAGATCGGCGTGGATACGGGGGGCTCCAACATCCAGTTCGCAGTTGATCCCGAGACGGGCGAGCTGGTGGTCATCGAGATGAACCCGCGGGTGTCGCGCAGCTCGGCCTTGGCCTCCAAGGCCACCGGCTTTCCGATCGCCAAGATCGCCGCTAAGTTGGCGGTCGGCTACACGCTGGATGAGATCACCAACGATATCACCCGCGTGACTAAAGCCTCTTTCGAACCCACCATTGACTATGTCGTGCTCAAGATGCCGCGGTTCGCGTTCCAGAAGTTTCCAGGGGCTGATCCCACGTTGACGACGCAGATGAAGTCGGTCGGGGAGGCCATGGCGATCGGCCGGACGTTCAAGGAAGCACTGCAGAAGGTAGTGCGGTCCCTTGAGGTGAATCGTGCCGGCCTCGTCTCACTCCAGTCGCTTGATGGGACGGTTCCTCCTGACATGAACCGGCGGGAGGAGGCGGTGGCCCGTGTTCGAAAAGCGCTAAGAACTCCTCATCCGGATCGGCTCTGGCACCTGGCTGACGCGATGCGTCTAGGTCTGCCGACCGAAGAGTTGTTCGCGTTGACGAAGATTGATCCCTGGTTCCTGGACCAGATCCGTGAAATCGTCGAGTTCGAAGATCGCCTGAAGAAAGCAAGTCGAAAGTCGAAAGTCGAAAGTCGAAACTTTTCAGACATGGGACGGTCAGAGCTTGGGACTTTGGACGCTGGTTTGTTGTGGGAAGCGAAAAAGCTTGGCTTCTCCGACGAGAGGATTGGTCAGTTGCTCGGGGTCGCCCAGAAAGAAGTCCGGCGGTGGCGTACGGATGGGTTGGCGGGAAGTCACCGGCAAGTGACCTACAAGCGGGTGGATACCTGCGCGGCTGAATTCGAAGCGCAGACCCCTTACCTCTACTCCACCTATGAGCAGAACTGTGAAGCTCGCCCGACCGGTCGGAAGAAAGTGATGATTCTCGGCGGCGGGCCCAACCGGATCGGGCAGGGGATTGAGTTTGATTACTGTTGCGTGCATGCAGCCTTCGCCCTCCGAGAGGAGGGCATTGAGACGATCATGGTCAACTGCAATCCGGAAACCGTCAGCACGGACTATGACATTTCGGATCGACTGTATTTCGAGCCCTTGACGGAAGAAGACGTACTGAACATTGTAGATCGCGAGCAGCCAATTGGGGTGGTCGTCCAGTTCGGTGGACAGACTCCGCTGAAACTGGCGCTCCCATTGGAGCGGGCTGGTGTGAAGATCCTGGGTACGAGCCCTGATGCCATTGATCGAGCCGAAGACCGGGAGCGGTTCCGGGATCTGCTTGATCGGCTGGGGATGAGGCAAGCAGCCAGCGGCATGGCGCGATCGGTCGAGGAGGCGGCGCGCGTCGCCGCCGCGATCAGCTATCCGGTCATGGTCCGTCCCTCATACGTGTTGGGCGGACGCGCCATGAAGATCATCTACGATGAGTCGAGCTTGGTGGCCTATGTGGAATCAGCCGTCAAGACCTCGCCGGACCATCCAGTGCTGATCGACAAATACCTGCAGGATGCCATTGAAATCGATGTGGATGCGATCTCGGATGGGCGGCGGGTGGTGGTGGCGGGGATTATGGAACACATTGAGGAGGCCGGTGTGCATTCCGGGGACTCGGCCTGCTCGCTGCCTCCCTATACGCTCGATGCGCACGTCGTCGCCGAGGTCCGACGCCAGACGACGGTGCTGGCCACAGAGTTGGGAGTGGTCGGTCTGATGAACACGCAGTTTGCAGTCAAAGATGGTCTGCTCTATGTGCTGGAGGTCAACCCCCGTGGGTCACGGACCGTGCCGTTCGTCAGTAAGGCGATCGGGGTGCCGCTAGCCAAACTGGCCATGAAGGTCATGGTCGGGAAAACTCTGGACGAACTCGGCTTTACGGAGGCGCCGACGGTGGGGCATATGACAGTGAAGGAGGCTGTCTTTCCCTTCACCAAATTTGCCGGCGTGGATGTCCTGTTGGGTCCGGAGATGAAGTCCACGGGAGAAGTCATGGGGATTGACGGCGATTTCGGGTGGGCCTACGCCAAATCCCAGGCTGCGGCCGGGGCCCCGCTCCCGAGGGGGGGGAGAGTGTTCATCAGCGTGAGGGAGGAGGACAGACCGGGGGCGCTGGAGGTGGCCAGACGGTTACTGCGGCTNNNNNNNNNNNNNGGTCGGAAACCAGTCCTCGCAGGCCGACTCCGTATCGATTCGCCGCGAGGCGCTCCAGCATGGGCTTTCCTACTATACGACGATGCCAGGCGCCAGAGCGGCGGTGACGGCCATCGAGGCTACTCTGAACAAAGGACTGACGATCCGGTCCTTGCAAGAATACCATGCGGGCAAGGGGCGAGAGACTAG
PROTEIN sequence
Length: 1074
MAQYVTREERIAVPRRHDISCILLIGSGPIVIGQACEFDYSGTQACRALKEEGYRVVLINSNPATIMTDPELADRTYIEPITLEVVERVIERERPDALLPTMGGQTALNIAVGLAERGTLAKYKVQLIGASSEAIHKAEDRGAFKQAMQRIGLKTPDSGSARTREEAFKAVEQIGFPVIVRPSFTLGGTGGNIAYNREEFERVVDWGLAMSPVGEILVERSVIGWKEFELEVMRDLKDNVVIVCPIENLDPMGVHTGDSITVAPAMTLTDKEYQVMRDAAVRIIREIGVDTGGSNIQFAVDPETGELVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEITNDITRVTKASFEPTIDYVVLKMPRFAFQKFPGADPTLTTQMKSVGEAMAIGRTFKEALQKVVRSLEVNRAGLVSLQSLDGTVPPDMNRREEAVARVRKALRTPHPDRLWHLADAMRLGLPTEELFALTKIDPWFLDQIREIVEFEDRLKKASRKSKVESRNFSDMGRSELGTLDAGLLWEAKKLGFSDERIGQLLGVAQKEVRRWRTDGLAGSHRQVTYKRVDTCAAEFEAQTPYLYSTYEQNCEARPTGRKKVMILGGGPNRIGQGIEFDYCCVHAAFALREEGIETIMVNCNPETVSTDYDISDRLYFEPLTEEDVLNIVDREQPIGVVVQFGGQTPLKLALPLERAGVKILGTSPDAIDRAEDRERFRDLLDRLGMRQAASGMARSVEEAARVAAAISYPVMVRPSYVLGGRAMKIIYDESSLVAYVESAVKTSPDHPVLIDKYLQDAIEIDVDAISDGRRVVVAGIMEHIEEAGVHSGDSACSLPPYTLDAHVVAEVRRQTTVLATELGVVGLMNTQFAVKDGLLYVLEVNPRGSRTVPFVSKAIGVPLAKLAMKVMVGKTLDELGFTEAPTVGHMTVKEAVFPFTKFAGVDVLLGPEMKSTGEVMGIDGDFGWAYAKSQAAAGAPLPRGGRVFISVREEDRPGALEVARRLLRXXXXXGRKPVLAGRLRIDSPRGAPAWAFLLYDDARRQSGGDGHRGYSEQRTDDPVLARIPCGQGARD*