ggKbase home page

PLM3_60_b1_sep16_scaffold_8377_1

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 1..786

Top 3 Functional Annotations

Value Algorithm Source
Putative Type IV pilus assembly protein PilB Tax=Candidatus Nitrospira defluvii RepID=D8P8D4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 261.0
  • Bit_score: 408
  • Evalue 3.10e-111
putative type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 261.0
  • Bit_score: 408
  • Evalue 8.70e-112
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 261.0
  • Bit_score: 433
  • Evalue 1.30e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_58_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 786
AAACCGCACGGAATCATCCTCTGTGTCGGACCGACTGGGTCCGGCAAAACGACGACCTTGCATGCGATTCTCAAGTACATCAATACCGACGAACGAAAAATTTGGACGGCCGAAGACCCCATTGAAATAACCCAAGACCGTCTCCGCCAAGTCCAGGTCCATCCGAAGATCGGTCTCACCTTCGCGACCGCAATGCGGGCGTTTCTGCGTGCCGACCCCGACGTCATCATGATCGGTGAGATGCGGGACAAAGAAACGGCCGACATCGCCATTGAGGCCTCGCTCACCGGCCACTTGGTGCTCAGTACCCTCCATACGAACAGTGCGGTCGAAACGGTGATCCGTTTGTTGGATCTCGGCTGCGACGCCTTCAACTTTGCCGACGCCATATTGGGAGTGCTCGCCCAGCGTCTGTGCAAACGGATCTGCATCCAGTGCAAGGAGGCCTATCACCCGAGTCGGCAGGAGTACGACGAACTGGTGCAGGGGTATGGCGCGCAGGACTGGCCCACACTCGGCATCGAATACACCGCCGCTTGGAGTTTGTACCGTGAACGAGGCTGCGAAGTCTGCAACCGAACCGGCTTCAAGGGGCGGATTCCCTTGCACGAACTGTTAAGAGGATCGAAAGAGATGAAGCAGCTCATCCAATCCAGAGCCAAGACCGCCGACATGCTCAGCCTTGCAATGAGAGAAGGGATGTCGACTCTGGTACAAGACGGGATACGAAAAGTCCTGCGCGGACAAACCACCTACCGGCAAGTCAGGGCCGTTGCGATGAAGTAA
PROTEIN sequence
Length: 262
KPHGIILCVGPTGSGKTTTLHAILKYINTDERKIWTAEDPIEITQDRLRQVQVHPKIGLTFATAMRAFLRADPDVIMIGEMRDKETADIAIEASLTGHLVLSTLHTNSAVETVIRLLDLGCDAFNFADAILGVLAQRLCKRICIQCKEAYHPSRQEYDELVQGYGAQDWPTLGIEYTAAWSLYRERGCEVCNRTGFKGRIPLHELLRGSKEMKQLIQSRAKTADMLSLAMREGMSTLVQDGIRKVLRGQTTYRQVRAVAMK*