ggKbase home page

PLM3_60_b1_sep16_scaffold_8377_5

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 2839..3366

Top 3 Functional Annotations

Value Algorithm Source
Putative Type IV pilus assembly protein PilV Tax=Candidatus Nitrospira defluvii RepID=D8P8D2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 178.0
  • Bit_score: 122
  • Evalue 2.30e-25
putative type IV pilus assembly protein PilV similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 178.0
  • Bit_score: 122
  • Evalue 6.40e-26
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 156.0
  • Bit_score: 157
  • Evalue 1.50e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 528
ATGACGTCGCCAATGGTAAACACGACGAAGCTACACTGCTTTTCTCGGTGCAAAGGGGAACAAGGTTTCTCCCTGTTGGAGGGGATGCTGGCGGCAGCCCTGCTGAGTACCGGTCTTCTTGCAATGTCGGGGATGCAGACGATTGCGCTGGTGAAGAACGTTGATGCAAACGAACTGACACGCATCACCACACTGGCGTCGGACATGATGGAGCGCATCCAATTTAACCGGCGGAACGCGGCCAGCTATAACGGGATCGATACGCAGAGTGCCGCCAACTGTAACGCCATCAGTGCCGCGGCGCAGCCGCAAGCAAGGGGAGATTGTCTGCTCTGGGACAGTCTCGTGGACGGCACCCAGCTCCAAACTGTCCAAGGCACGGTTACGGTGTCCAACGTGCTCGCACCGACGGTCCTTAACCAGAGGAATGTCACCGTGACCATTACCTGGCTGGGATCCCAGAACAGCGATTCTACTGTGAAGCGACCGCGATCCTTGACGCTCAATCGAGTGGTCGCGCCCGAATGA
PROTEIN sequence
Length: 176
MTSPMVNTTKLHCFSRCKGEQGFSLLEGMLAAALLSTGLLAMSGMQTIALVKNVDANELTRITTLASDMMERIQFNRRNAASYNGIDTQSAANCNAISAAAQPQARGDCLLWDSLVDGTQLQTVQGTVTVSNVLAPTVLNQRNVTVTITWLGSQNSDSTVKRPRSLTLNRVVAPE*