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PLM3_60_b1_sep16_scaffold_8911_8

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: comp(4502..5461)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Candidatus Nitrospira defluvii RepID=D8PCP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 4.90e-119
rpoS; RNA polymerase, sigma S (sigma 38) factor similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 1.40e-119
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 6.90e-119

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 960
ATGGGTCGTGATGACGACGATGAAGTGAACCAACCGGTGGGCGCAGCCGATGAGGTAGAGGAGGAGCTCGAGCCTTCGGCGCAAGGGGGAAAGCGGAGCCGGCGCCGGACGCAACGAGAGAACCAGACTGAGGGGCTCGATACCGTCAAGAGCTACCTCAGGGATATTCGCAAGTCCACCCTCTTGACGTTCGAACAGGAGCAAGCCCTCGGAAAACGCGTGATGGCCGGTGATGTCAGCGCCCGTGATCAGATGATCGAAGCGAATCTGCGGCTGGTGATCAGCATCGGCAAGCGGTACATGAATCGAGGGTTCCCCTTCTCGGACATCGTGGAGGAGGGCAACCTGGGGCTCATCAAAGCCGTCGAGAAGTTCGACTACAAGCGAGGGTTCCGGTTCAGCACCTATGCCTCGTGGTGGATACGCCAGTTCATCGAGCGGGCCATCATCAATCAAGGGAAACTCATTCGGCTGCCCGTCCATGTGGTGGAACGTCTGAACCGGTTCCTGTCCGCAGTCGAATTCCTCGGCCAGGGACTGAGTCGTGAGCCAAGAACGGAAGAGATCGCGCGGCGTATGAAGATTCCGGAGGAGGGGGTAACCGACCTCAAACAGTTGATCCGGACCACCTGCTCGCTGGACAGTCCGATCAATGAGCGGACCGACACGTTCCTGCGCGATGTCATCGAAGATCCGACGACTCTCTCTCCGGCGGACACGGCGGAGGGCGTGCTGCGTCGCGAGGAGCTGATGGGATGGGTCACGGATTTGCCTGAGAAAGAGCAAGAGGTGATCAAGAAGCGGTTCGGGCTTGACGGGGGCGAGGACCAGACGTTAGAGGAGATCGGCCAAAGTCTCGGGCTCACGCGCGAACGCGTTCGGCAGATTGAAACGGCGGCTCTCGGCAAACTTCGGTCGGTCATCGAGCAAAAAACCATGAAACAGGAGGATCTCTTGTAG
PROTEIN sequence
Length: 320
MGRDDDDEVNQPVGAADEVEEELEPSAQGGKRSRRRTQRENQTEGLDTVKSYLRDIRKSTLLTFEQEQALGKRVMAGDVSARDQMIEANLRLVISIGKRYMNRGFPFSDIVEEGNLGLIKAVEKFDYKRGFRFSTYASWWIRQFIERAIINQGKLIRLPVHVVERLNRFLSAVEFLGQGLSREPRTEEIARRMKIPEEGVTDLKQLIRTTCSLDSPINERTDTFLRDVIEDPTTLSPADTAEGVLRREELMGWVTDLPEKEQEVIKKRFGLDGGEDQTLEEIGQSLGLTRERVRQIETAALGKLRSVIEQKTMKQEDLL*