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PLM3_60_coex_sep16_scaffold_937_21

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 28655..30070

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family (Fragment) Tax=Caulobacter sp. AP07 RepID=J2GDT0_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 417.0
  • Bit_score: 690
  • Evalue 7.30e-196
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL28035.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 417.0
  • Bit_score: 690
  • Evalue 1.00e-195
RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 423.0
  • Bit_score: 630
  • Evalue 2.00e-178

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGACGGTCGCCGACGCCCATCGCACGATCCTCGCCGTCTGGCGGATCGAGCAGCCCCGGCTGATCACCAGTCTGGCGAGGATGCTGCGCGATGTGCCGCTGGCCGAGGATTTGACGCAGGAAGCCCTGTTGGCCGCCCTCGAGCACTGGCCCGCGACAGGCGTTCCGGAAAAACCCGGCGCCTGGCTGATGGCGACCGCCAAGCGCCGGGCCCTGGATCATCTGCGCCGCGGCCGGATGCTCGAGCGCAAGCACGAGATGATCGCCTGGGACATGGAGGAGGAGCAGCAGGCCATGCCCAATCTCGACTCCGCCCTGGACGATGACATCGGCGATGAACTGCTTCGGCTCATCTTCACCGCCTGTCACCCGCGCTTGTCGCGTGAGGCCCGCGCGGCCCTGGCGCTACGGATGATCTGCGGCTTGACGACCGAAGAGATCGCCAGGGCCTTCCTGCTGCCGGAGGCGACGATCGCCCAGCGCATCGTGCGCGCGAAGCGGACTCTTTCGGAATCGGGGCTGGCCTACGAGACGCCACGCGGCGAGGAGCTCTCGGAGCGGCTCTTCTCGGTGCTTGAGGTCGTCTATCTCATTTTCAACGAAGGGTATACTGCGGCGCGCGGCCAGGACTGGCTGCGCCCCCAGCTCTGCAATGAAGCGCTTCGCATGGGCCGCGTGCTCACCTCCATCGCGCCGCACGAGCCCGAAGCCCATGGACTGCTCGCCCTGATGGAGCTGAACGCCTCGCGCACGGCGGCGCGTACTGACGCAGGGGGCGAGCCAATCCTCATGCTGGACCAGAACCGCGCACTCTGGGACCAGCTCCAAATCCGGCGGGGGATGCAAGCGCTCGGACGAGCGCGCGAACTAGGCGGAGCGGGCGGCATTTACGCCCTCCAGGCGGCGATTATCGCCTGCCACGCCCAGGCGAGGACGGCGGGCGATACCGACTGGTCGCGCATCGCCGGACTTTATGCGGAGCTGGCGGCGGTCGTGCGCTCGCCAATCATCGACCTCAACCGAGCGGTTGCCGTCGGCATGGCCGAGGGCCCAGAAGTGGCGCTGGCGATCGTGGACCGCCTGGTGCGCGAGCCGGCGCTCAAAGGCTATCACCTGCTGCCGAGTGTTCGAGGCGACCTACTCCACAAGCTCGGCCGCTACGAGGAGGCGCACGCCGCGTTCGAAGCGGCCGCGGCGCTGGCGGCTGATGGCGGCCGACGAGGCCGGCACGCTGACCGCGCTCAAGGCTCGGCGCAAGGGAGTGTTGGACCCGTTGGTGTCCAAGCATCAGGGCCGCGTCTTCAAGCTGACCGGGGATGGCGTACTGGTGGAATTTGGCAGTGCGGTCAACGCCGTGCAATGCGCCGTCGAACTGCAGAAGAAGATGGCTGCAGCGAACGACGGCGTTGCCGATGA
PROTEIN sequence
Length: 472
MTVADAHRTILAVWRIEQPRLITSLARMLRDVPLAEDLTQEALLAALEHWPATGVPEKPGAWLMATAKRRALDHLRRGRMLERKHEMIAWDMEEEQQAMPNLDSALDDDIGDELLRLIFTACHPRLSREARAALALRMICGLTTEEIARAFLLPEATIAQRIVRAKRTLSESGLAYETPRGEELSERLFSVLEVVYLIFNEGYTAARGQDWLRPQLCNEALRMGRVLTSIAPHEPEAHGLLALMELNASRTAARTDAGGEPILMLDQNRALWDQLQIRRGMQALGRARELGGAGGIYALQAAIIACHAQARTAGDTDWSRIAGLYAELAAVVRSPIIDLNRAVAVGMAEGPEVALAIVDRLVREPALKGYHLLPSVRGDLLHKLGRYEEAHAAFEAAAALAADGGRRGRHADRAQGSAQGSVGPVGVQASGPRLQADRGWRTGGIWQCGQRRAMRRRTAEEDGCSERRRCR*